Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00691 ATGAACAAAACCCAGATAATAGAGTTATGTAGGTTTTTTTCCATTGACTTTGTACCATGCCTCTTGTGCTTGTTTTTCTTTTTCTTCTTCCATTTAACCACTTGTAATTCAATCAACACCCCTTCAGATAAAATCCTCCTCAACTGTGGTTCTTCTGGAGTATCATCATTCAATGGTGTAAATTGGGTAGGAGATGTTGGATCTAGTTTCTTGCCTCCAGCTCATGACATGAGTTCATCTACACTCTTGGTCTCAAACATAGACTCTGTAGCACCAAAAGTTCCATACTCAACAGTAAGAGTAATTCATTCTCCATTCACCTATTCATTCCCCTTCTCCCCTGGCCTTAAATTCATTCGTTTTTACTTTCTATCAACTTCATATTTAATGATGAACCCCTCCAAGGCTTATTTTTCTGTCAAAGCTGGTCCCTACACTCTTGTTAGTAATTTTACTCCATCTGTTGCTGCAGAAGAGCTCAACTTGGTGTATATCACCAAGGAGTTCTTAATCAATGTCAGGGAAGAGAAACTCAACATTACTTTAAGTCCATCTCCTCTCATTTCCAATGCATTTGCTTTTGTAAATGGCATTGAGATCTTTTCAGTGCCCCTCAGTATGTATTTTCAAGGTTCCAAGGTTCCTGTTCCTTATCTTGGACACCAGGAACCATTAATCATTAATGATGAACATGCTCTTGAGATGCTTTACCGGGTTAACATAGGTAATGATGAACATGATGGTGATGTTGAAGATGCTTTTGGGACATGGTTGGATGATTTCAAATACATATGTGGTTTACAATATGGAAGTTTCCTTAATATAAAGAGCCTTCTTGTTGTAATGAATTTCACTTTCGTATCAAATTATTATAATTCTTCAGCAGAACCACTATATTGGACTGCCAGGACAATGGGTAGCCATGGAGATGCCAACACGAGATACAATTTAACATGGTCATTCCCAGTTGATTCTGGATTCAAATACCTTGTTAGGCTTCACTTCTGTGAGATCTCCTTAGAGGTAACGCAGGTCAATCAAAGGGTGTTCACAGTGTACATAAACAACCAAATAGCTGAGGAGAGGATAGACTTAGTGGCTTTGGCTGGTGCCCCATTTACTCCATTGTACAGAGACTATGTTGTTATGGTTCCCATGGATAGTGAGACAAGCGAAGATATGTGGATCGCACTTCACCCCAATTTGGAGTCAAAACCAAAATATGCTGATGCCATATTGAATGGCATTGAGATCATCAAGTTAAGTGATAGCAATTATAATCTTGCAGCAAGTTTCCAATTGAAAAAGGAACAAAAGGAGAAGAAAGTTCCACACCTCATTATTGTGGCTGGTACTTTAGGTGCTACTTTAGGACTGTTCATTACATTTTTTATTCTTATTCACCGAGCATGGAAAAAGGGAACATTTCGGGTACACCCAGTTCATTCCACAGGAAGAAGTCACAAAAACATTCAAGTAATAGTGACCTCAAGTCATTGCTATCAATTCACATTAGCAGAGATCAGCATTGCCACCAGCAACTTTAGTGAAGCTCTTGTCATTGGGGAGGGAGGCTTTGGAAAAGTGTACAAAGGCACCATGCCTGATGGACTGACTCATGTAGCAATAAAGCGCTCTAAGCCTAGTTCTCGCCAAGGATTCAAGGAGTTTCAAAATGAGATCAATTTTTTCTCATTTCGTCACATGAATCTAGTGTCTCTGATGGGCTACTGCCAAGAGGGCAATGAACTGATACTTGTCTATGAATACATGGCTCAGGGCTCTCTTTGTGATCATTTATACAAGAAGCAAAAGCAGCCACTGCCTTGGAATCAAAGACTTAAGATTTGTGTCGGTGCAGCTCGAGGACTACATTACCTCCATACAGGCACAGGGTACCCAGTGATTCACCGTGATATCAAGTCAGCCAATATATTATTGGATCAGAATTGGGTTTCCAAGATTGCAGATTTTGGGCTATCTAGAATAGTTCCCTCAATTTACCACACCCATGTTAGCACTGAGGTCAAAGGTACTTTTGGATATTTAGACCCTGAGTACTATAAGAGAAGAAAACTCACTGAAAAATCTGATGTCTATTCATTTGGAGTGGTTTTGTTTGAAGTATTATGTGGAAGACCAGCTGTGAATCCTGTGGTAGTGGAAGAGGAAAGTGAGAAAGTTGGCTTGGCTGAGTGGGCCATGCATTGTTATCAATCTGGAACTGTTCATCGATTGGTGGACCCGCATTTAGAAGGAATGATTAGGCAAGAATGCCTAAAGGCTTTTGTGGATATTGGCATCCAGTGCTTGAATCACAAGAGTGCAGAAAGGCCAACTATGGCAGAGGTGCTTGGTAATTTGGAGAAGATCCTTTCCTTGCAGGAGAGTTTAGAGGAACAAGAAATAAATACAAGTCAATTCATGCATGAGACTGAACTGGAGTAA 2448 0.4003 MNKTQIIELCRFFSIDFVPCLLCLFFFFFFHLTTCNSINTPSDKILLNCGSSGVSSFNGVNWVGDVGSSFLPPAHDMSSSTLLVSNIDSVAPKVPYSTVRVIHSPFTYSFPFSPGLKFIRFYFLSTSYLMMNPSKAYFSVKAGPYTLVSNFTPSVAAEELNLVYITKEFLINVREEKLNITLSPSPLISNAFAFVNGIEIFSVPLSMYFQGSKVPVPYLGHQEPLIINDEHALEMLYRVNIGNDEHDGDVEDAFGTWLDDFKYICGLQYGSFLNIKSLLVVMNFTFVSNYYNSSAEPLYWTARTMGSHGDANTRYNLTWSFPVDSGFKYLVRLHFCEISLEVTQVNQRVFTVYINNQIAEERIDLVALAGAPFTPLYRDYVVMVPMDSETSEDMWIALHPNLESKPKYADAILNGIEIIKLSDSNYNLAASFQLKKEQKEKKVPHLIIVAGTLGATLGLFITFFILIHRAWKKGTFRVHPVHSTGRSHKNIQVIVTSSHCYQFTLAEISIATSNFSEALVIGEGGFGKVYKGTMPDGLTHVAIKRSKPSSRQGFKEFQNEINFFSFRHMNLVSLMGYCQEGNELILVYEYMAQGSLCDHLYKKQKQPLPWNQRLKICVGAARGLHYLHTGTGYPVIHRDIKSANILLDQNWVSKIADFGLSRIVPSIYHTHVSTEVKGTFGYLDPEYYKRRKLTEKSDVYSFGVVLFEVLCGRPAVNPVVVEEESEKVGLAEWAMHCYQSGTVHRLVDPHLEGMIRQECLKAFVDIGIQCLNHKSAERPTMAEVLGNLEKILSLQESLEEQEINTSQFMHETELE* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00691 815 CDD STKc_IRAK 521 791 - -
Rops1g00691 815 FunFam Receptor-like protein kinase FERONIA 591 810 - -
Rops1g00691 815 SMART serkin_6 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00691 815 Gene3D - 231 422 - -
Rops1g00691 815 Gene3D - 45 203 - -
Rops1g00691 815 FunFam receptor-like protein kinase FERONIA 480 590 - -
Rops1g00691 815 FunFam FERONIA receptor-like kinase 44 204 - -
Rops1g00691 815 Pfam Protein tyrosine and serine/threonine kinase 520 787 IPR001245 GO:0004672|GO:0006468
Rops1g00691 815 Gene3D Transferase(Phosphotransferase) domain 1 591 813 - -
Rops1g00691 815 ProSiteProfiles Protein kinase domain profile. 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00691 815 FunFam FERONIA receptor-like kinase 231 422 - -
Rops1g00691 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Rops1g00691 815 SUPERFAMILY Protein kinase-like (PK-like) 486 787 IPR011009 -
Rops1g00691 815 ProSitePatterns Protein kinases ATP-binding region signature. 521 544 IPR017441 GO:0005524
Rops1g00691 815 Pfam Malectin-like domain 47 420 IPR024788 -
Rops1g00691 815 Gene3D Phosphorylase Kinase; domain 1 478 590 - -
Rops1g00691 815 PANTHER OS03G0124300 PROTEIN-RELATED 21 473 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00691 Rops-Chr1 17475126 17477905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00691 40 815 Receptor kinase-like Gene Family AT3G51550 44.895 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops1g00691 Malectin_like 2.4e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00691 - - gmx:100776324 1147.5