Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00685 ATGCTTTTCATCATACGTGGTCGCCTTGAGAGTGTCACCACAGACGGTGGGAGGAGTGGATTTTTCAACCGCAGTTTTCTAAAAGAGGCTGACTTCTGTGGGGAGGAGCTTTTAACCTGGGCTTTGGACCCCAGATCTGGTTCTAATCTCCTATCTTCTACTCGAACAGTTAAGGCATTAACGGAAGTTAAGGCTTTTGCCTTAACTGCGGATGAGTTAAAATTTGTTGCCAGTCAGTTTAGGCGCCTTCCCAGTAGACAGACTCTTTGCTTGGTTGGTAGGGAGTTTCGTCGTGAAGAAAAGGTGAAGAGGAAAATAACAAGTGGTGGTGCTCGGTGGAGGAAAGCTTCACCTTCCGTTTTCCTCCTTTTGTGGTAA 378 0.4656 MLFIIRGRLESVTTDGGRSGFFNRSFLKEADFCGEELLTWALDPRSGSNLLSSTRTVKALTEVKAFALTADELKFVASQFRRLPSRQTLCLVGREFRREEKVKRKITSGGARWRKASPSVFLLLW* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00685 125 Gene3D Jelly Rolls 1 82 IPR014710 -
Rops1g00685 125 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 88 - -
Rops1g00685 125 SUPERFAMILY cAMP-binding domain-like 1 81 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00685 Rops-Chr1 17212340 17213637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00685 1 88 Ion Channels AT4G30560 89.773 6.11e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00685 K05391 - gmx:100820202 160.229