Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00684 ATGCTGAGCTCCATTAAAAATCGCGAGACTTGCGTGATTCTTCATCGATTTCCTATCTGTGTTGCCAATACCACAGATTGTGGTTTGGAGATTTCTTCAGAGAGAATAGCTGGTGTCTTTGCTGAAACTGCTTGGGCAAGTGCTGCATATTACTTGCTGTTATACATGCTTGCTAGTCATATAGTTGGTGCTTTTCGGTACTTGTTAGCTATTGAACGCAACGACTCATGCTGGCAGAAGGCTTGTAGTGACAATGGGTGCAATAAAGACTTCCTGTACTGTGGCAACCAGCACATGGAAGGTTATAGTGCTTGGCAGAATAGAAGTGAAGCTATTCTTAAGTCAAAATGCTCTGTAGATGTTGAGCCTCCTTCTTTTGATTATGGAATTTTCACACAGGCCTTGCAATCTGGTATCATTTCATCTAAAAAGTTCTTCTCCAAATATTGTTACTGTTTATGGTGGGGCCTCCAGAATTTGAGTACACTTGGCCAGGGGCTTCAAACTAGCACTTTCCCTGGAGAGGTTATCTTTCCAATAGCACTAGCTATATCTGGCCTCATCCTCTTTGCGCTTCTGATTGGCAACATGTAG 594 0.4259 MLSSIKNRETCVILHRFPICVANTTDCGLEISSERIAGVFAETAWASAAYYLLLYMLASHIVGAFRYLLAIERNDSCWQKACSDNGCNKDFLYCGNQHMEGYSAWQNRSEAILKSKCSVDVEPPSFDYGIFTQALQSGIISSKKFFSKYCYCLWWGLQNLSTLGQGLQTSTFPGEVIFPIALAISGLILFALLIGNM* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00684 197 Pfam Ion transport protein 42 197 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops1g00684 197 SUPERFAMILY Voltage-gated potassium channels 34 197 - -
Rops1g00684 197 Gene3D - 29 197 - -
Rops1g00684 197 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 35 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00684 Rops-Chr1 17211283 17211985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00684 29 197 Ion Channels AT5G57940 72.414 2.42e-84 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00684 K05391 - gmx:100784309 263.848