Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00638 ATGATCATCTTACTGTTTCTCGTAGTGGCATTGCCACTGGCCAATGGAGAAGAATGCGAGTCCAAGTACGGTGGAGGATGCCATGACAAGAATAAGGCACTGAAGTTGAAAATCATTGCCATTTTCTGCATACTAATGACCAGCATGATTGGCATTTGCCTCCCAATCTTGTCTAGTGAGGTTCCTGCTCTTAACCCTGACGGAAACATCTTTGTCCTCATCAAGGCCTTCGCTTCCGGCGTCATTCTCGCCACCGGTTACATGCACGTCATGCCTGATTCCTTCGATGACCTGACTTCCCCTTGCTTACCTCAACGTCCCTGGCACAACTTCCCCTTCACCACCTTCATCGCTATGCTCTCCGCCGTTTTCACCCTCATGGTTGATTCCTTCTCTATCAGCTTCTTCAACAAGAAGCTCTCTCCTTCTTCTTCTGTCACTGCTTTGGAAGACGGACATGCCGCTGAGCCAAAGGAATTGGAACAACTAGATCATAATAGTCATGGTCATGGTCATGCACATGTGATGAAGAGCGTTAATGCAGAACAGTTGCTACGTTACCGTGTCGTGGCTCAGGTGTTGGAGTTAGGGATAGTGGTGCATTCGGTGGTGATTGGTTTATCAATGGGAGCTTCGGAGAATCCATGCACTATAAGGCCTCTCATTGCTGCACTTTGCTTCCATCAACTCTTTGAGGGAATGGGGTTAGGTGGTTGCATACTTCAGGCTGAATATGGATTCAAGGTGAAAGCCATTATGATTTTCTTCTTCTCTGCAACGACGCCGTTTGGGATCGCTTTGGGGATTGGTTTGTCGAAAGTGTATAGTGACACAAGTCCAACTGCTCTCATTGTGGAGGGGATTCTGAATGCTGTATCTGCGGGGCTTCTGAATTATATGGCACTCGTTGATTTATTGGCTTCTGATTTTATGGGACCTAAGTTGCAAGGTAGAATGAAGCTTCAGAGTTGGTGTTATGTGGCAGTTTTGTTAGGCGCAGGAGGCATGTCTGTGATGGCAATATGGGCATAG 1032 0.4709 MIILLFLVVALPLANGEECESKYGGGCHDKNKALKLKIIAIFCILMTSMIGICLPILSSEVPALNPDGNIFVLIKAFASGVILATGYMHVMPDSFDDLTSPCLPQRPWHNFPFTTFIAMLSAVFTLMVDSFSISFFNKKLSPSSSVTALEDGHAAEPKELEQLDHNSHGHGHAHVMKSVNAEQLLRYRVVAQVLELGIVVHSVVIGLSMGASENPCTIRPLIAALCFHQLFEGMGLGGCILQAEYGFKVKAIMIFFFSATTPFGIALGIGLSKVYSDTSPTALIVEGILNAVSAGLLNYMALVDLLASDFMGPKLQGRMKLQSWCYVAVLLGAGGMSVMAIWA* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00638 343 PANTHER ZINC/IRON TRANSPORTER 33 340 - -
Rops1g00638 343 Pfam ZIP Zinc transporter 35 340 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops1g00638 343 NCBIfam ZIP zinc/iron transport family 19 343 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00638 Rops-Chr1 16128526 16129630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00638 15 343 Inorganic Solute Cotransporters AT1G31260 57.227 1.45e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00638 K14709 - gmx:100784872 496.508