Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00630 ATGGCGAGTAAAATCTCCAAAAACCTAGCAATGATCATCTTACTGTTTCTCTTAGTGGCATTGCCACTGGCCAATGGAGAAGAATGCGAGTCCAAGTACGGTGGAGGATGCCATGACAAGAATAAGGCACTGAAGTTGAAAATCATTGCCATTTTCTGCATACTAATGACCAGCATGATTGGCATTTGCCTCCCAATCTTGTCTAGTGAGGTTCCTGCTCTTAACCCTGACGGAAACATCTTTGTCCTCATCAAGGCCTTCGCTTCCGGCGTCATTCTCGCCACCGGTTACATGCACGTCATGCCTGATTCCTTCGATGACCTGACTTCCCCTTGCTTACCTCAACGTCCCTGGCACAACTTTCCCTTCACCACCTTCATCGCTATGCTCTCCGCCGTTTTCACCCTCATGGTTGATTCCTTCTCTATCAGCTTCTTCAACAAGAAGCTCTCTCCTTCTTCTTCTGTCACTGCCTTGGAAGACGGACATGCTGCTGAGCCAAAGGAATTGGAACAACTAGGTCATAATGGTCATGGTCATGCACTTGTGATGAAAAGCGTTAATGCAGAACAGTTGCTACGTTACCGTGTCGTAGCTCAGGTGTTGGAGTTAGGGATAGTGGTGCATTCGGTGGTGATTGGTTTATCAATGGGAGCTTCGGAGAATCCATGCACTATAAGGCCTCTCATTGCTGCACTTTGCTTCCATCAACTCTTTGAGGGAATGGGGTTAGGTGGTTGCATACTTCAGGCTGAATATGGATTCAAGGTGAAAGCCATTATGATTTTCTTCTTCTCTGCAACGACGCCGTTTGGGATCGCTTTGGGGATTGGTTTGTCGAAAGTGTATAGTGACACAAGTCCAACTGCTCTCATTGTGGAGGGGATTCTGAATGCTGTATCTGCGGGGCTTCTGAATTATATGGCACTCGTTGATTTATTGGCTTCTGATTTTATGGGGCCTAAGCTGCAAGGTAGAATGAAGCTTCAGAGTTGGTGTTATGTGGCAGTTTTGTTAGGCGCAGGAGGCATGTCTGTGATGGCAATATGGGCATAG 1056 0.4688 MASKISKNLAMIILLFLLVALPLANGEECESKYGGGCHDKNKALKLKIIAIFCILMTSMIGICLPILSSEVPALNPDGNIFVLIKAFASGVILATGYMHVMPDSFDDLTSPCLPQRPWHNFPFTTFIAMLSAVFTLMVDSFSISFFNKKLSPSSSVTALEDGHAAEPKELEQLGHNGHGHALVMKSVNAEQLLRYRVVAQVLELGIVVHSVVIGLSMGASENPCTIRPLIAALCFHQLFEGMGLGGCILQAEYGFKVKAIMIFFFSATTPFGIALGIGLSKVYSDTSPTALIVEGILNAVSAGLLNYMALVDLLASDFMGPKLQGRMKLQSWCYVAVLLGAGGMSVMAIWA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00630 351 PANTHER ZINC/IRON TRANSPORTER 43 348 - -
Rops1g00630 351 Pfam ZIP Zinc transporter 45 348 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops1g00630 351 NCBIfam ZIP zinc/iron transport family 29 351 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00630 Rops-Chr1 15839859 15841028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00630 13 351 Inorganic Solute Cotransporters AT1G31260 55.587 5.65e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00630 K14709 - gmx:100784872 495.352