Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00625 ATGCTCTTACGTGGCATCATTTCCACCCCTCTCCCATCCTCACTCCGGCTCCACGTCGCATCCCCGACTCACCCCCGAAACGTCACCGTTTCTTCCCGACCCGCCGTCGAGTACCCGCTTTCAGTTTCCGACGAGTTACTCGAGTCGCGCGGCTTCGTTCTGCGGCGGAGCGCGGAGGGGCTGAACTTGGACGAGCTTAACGGCGTTTTCCTGGCGGTGGGGTTTCCACGGCGGGACCCAGAGAAGATTCGTGTGGCGTTAGAGCATACGGAGTCATTGGTGTGGGTTGAGCAGCGGAAAACGCAGCGTGCGGTGGCGTTTGCCAGAGCCACCGGTGACGGCGTTTTCAATGCCATCATATGGGACGTGGTGGTGGACCCTTCGTTTCAAGGAATTGGGCTTGGTAAGGCTGTAGTTGAGAGGCTCATTCAGGATCTATTGTGTAAAGGGATTTCCAATATTGCCCTTTACTCTGAGCCTCGTGTTCTTGGGTTCTATAGACCCTTGGGTTTTGTTGCTGACCCTGATGGTATTCGAGGAATGGTTTACTCCAGAAAACAGAAACAAAAGAAAAAGATAGGACCTTTTTGA 591 0.5415 MLLRGIISTPLPSSLRLHVASPTHPRNVTVSSRPAVEYPLSVSDELLESRGFVLRRSAEGLNLDELNGVFLAVGFPRRDPEKIRVALEHTESLVWVEQRKTQRAVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVVERLIQDLLCKGISNIALYSEPRVLGFYRPLGFVADPDGIRGMVYSRKQKQKKKIGPF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00625 196 Pfam Acetyltransferase (GNAT) family 85 171 IPR000182 GO:0016747
Rops1g00625 196 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 52 189 IPR000182 GO:0016747
Rops1g00625 196 Gene3D - 50 190 - -
Rops1g00625 196 PANTHER ACYL-COA N-ACYLTRANSFERASE 38 190 IPR045039 GO:0008080
Rops1g00625 196 FunFam Putative acetyltransferase NSI 57 184 - -
Rops1g00625 196 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 62 175 IPR016181 -
Rops1g00625 196 CDD NAT_SF 103 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00625 Rops-Chr1 15696078 15696783 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops1g00625 Acetyltransf_1 1.8e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00625 K22450 - gmx:100778613 291.582