Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00593 ATGGTCTTCCATCTCGAGACTACAAGGATGGCTTATGAGCAAACCTGTGAAGATCCTGGTGAGCTCACCTTGGAGGATATGATGCGGTCTCATGGTAATGGTGGGGATGACGTTGATCAAGAGTGTCAGGTTCCAGCATTCAGAGAGTACGGTCTGAATGAACTTCGAAGGGCCACAAATGAGTTCAGCACTGATTACATTGTCTCTGAGAGTGGTGAGAAAGCTCCCAATGTGGTCTGCAGAGGGAGGCTTGAGAACAATCGGTTAGTGGCTGTCAAGAGGTTCTCCAAACTGTCTTGGCCTGATGCTCGACAGTTTATGGCAGAGGCAGCTGGGGTTAGGAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGCTGCCCTGAAGGAGATGAAAGGCTCTTGGTAGCCGAGTACATGCCAAATGATACTTTGTCCAAGCATCTCTTTCATTGGGACAAGCAACCATTACCATGGGAAATGCGTGTTAGAGTTGCATACCATGTTGCCCAGGCTCTAGATCATTGTAGCATGGAAAACCGGAAATATATCATGATCTGA 564 0.4752 MVFHLETTRMAYEQTCEDPGELTLEDMMRSHGNGGDDVDQECQVPAFREYGLNELRRATNEFSTDYIVSESGEKAPNVVCRGRLENNRLVAVKRFSKLSWPDARQFMAEAAGVRKVRHKRLVNLIGCCPEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKYIMI* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00593 187 ProSiteProfiles Protein kinase domain profile. 65 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00593 187 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 36 183 IPR045845 GO:0004672|GO:0009742
Rops1g00593 187 Pfam Protein tyrosine and serine/threonine kinase 79 178 IPR001245 GO:0004672|GO:0006468
Rops1g00593 187 SUPERFAMILY Protein kinase-like (PK-like) 72 178 IPR011009 -
Rops1g00593 187 FunFam probable serine/threonine-protein kinase At4g35230 37 140 - -
Rops1g00593 187 Gene3D Phosphorylase Kinase; domain 1 36 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00593 Rops-Chr1 14798137 14798991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00593 50 174 Trihelix Transcription Factor Family AT4G32710 40.800 1.58e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Rops1g00593 PK_Tyr_Ser-Thr 9.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00593 K14500 - gmx:100793576 305.064