Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00455 ATGGCAGCCCACTCTGTTTTTGGTTTCCTTTTTCTACTCTGTTATTCTCTGCTTCTCTCGGCTGCAGCTCAAGGGGAACCCCATGAAGATTGCGGAAAGCATTGGTGTGGATCTCTTGGGGAAATCTCCTTCCCCTTCACCGCCACTGAGAAACCAGAATGTGGCATACAGATAATTGATTGTGACAACGACAAACTAGTTAAAAAAATCCAACTGGGAAACCAAAGTTATGACATTTATCGCATCCATCGGGACGGCAAGTACAGTTCAATATTCATCTCCCAACCGGAAATTCATTTACCCATTCTTCTTCCATTTTCATGCTTACAACTTAAGCTTCCAAATGGACAGGATTCCTCTTCCTCTGACCCATGTGTACTCTCAACTTCGTTTCTCGAAATTGGAGAAAAAATTTCCAAGTCTTGTGAAGACTGTTTTCATCCAAGAAGCCGATGTCAACTTCATACAGATTTCATTTGCGTCGATGATTTCCTCTTTCCTCCTCGTCCTGATCCTGAAACAAAAGCCAATCCTCCTGATGCTGGAACAAAGGACGAGGAACGGCATTTGGAGGCTGCGGTAATAGGTTTGTCTATTGGATTGGCAACCGTGATTTCACTTGCCTTGTTTGTTATTTTTTTCCTGTACAATCGAACAAACAAATCTTCAGGCGTCCAAGACCAACCAAGAAGCACTTATTCTGGTCCCTACAGAAATACAACACACCCAGAAAGTGGAGCAATCTATTTTGGGATCCCTGTTTTCTCCTATGAGGAGCTCCAAGAAGCAACAAACAATTTTGATCAAGCTAGAGTGCTTGGAGAAGGAGGCTTTGGGATTGTTTACTACGGAAAGCTTCGAGATGGACGAGAAGTTGCAGTGAAGCGCCTACTTGAGCGTAACTACAGGCCAGTGGAATCATTCATCAATGAAATTCAGATCCTCACTCGCATGCGCCACAGAAATCTCGTGACCCTTTATGGTTGCTCTTCACGTCACAGTCGTGAGTTGCTGCTAGTATATGAATACGTTCCAAATGGCACTGTTAGTTGCCATCTCTTTGGCGATAAGGCGAAGCATGGCTTATTGCCATGGCCTGTGAGAATGAAAATTGCCATAGAGACTGCTTCTGCATTGGCTTATCTCCATGCTTCTGACATCATTCACCGTGACGTGAAATCCAGCAACATTCTCCTTGACAATAACTTTGGTGTTAAAGTAGCTGATTTTGGGCTATCAAGATTGTTCCCCCATGATGTCACACATGTCTCCACAGCTCCAAGGGGTACCCCGGGTTACGTTGACCCGGATTATCGTCTATGCTACCAGCTTACAATCAAGAGTGATGTCTATAGCTTTGGAGTTGTTCTTGTTGAACTAATATCGTCTTTGCCAGCAGTTGACATGAACAGGGACAGCAATGAGATTAATTTGGCAAAGCTAGCTATAAGGAAGATTCAGAGAAGGGCATTTTGTGAGTTGATTGATCCTTCCCTTGGTTGTCAGACAGATGGCCAGTTGAAAAAGATGATAATATCAGTAGCAGAATTGGCATTTCAGTGTTTGCAAGGGGACAAGGAATTGAGACCCTCTATGGATGAAGTATTGGAGGTGCTGCAAAGAATTGAAAGTGGGAAGGATGAGCCAGGGAATCTTGAGGGAATTGAAGTTCATGGGGCTGGGGTTTCACAAAGTTATGCACATCCATCACTTCCAAACACTTTGATGAAGCCCCAGCGCCATCACCAAACAGTCTGA 1758 0.4403 MAAHSVFGFLFLLCYSLLLSAAAQGEPHEDCGKHWCGSLGEISFPFTATEKPECGIQIIDCDNDKLVKKIQLGNQSYDIYRIHRDGKYSSIFISQPEIHLPILLPFSCLQLKLPNGQDSSSSDPCVLSTSFLEIGEKISKSCEDCFHPRSRCQLHTDFICVDDFLFPPRPDPETKANPPDAGTKDEERHLEAAVIGLSIGLATVISLALFVIFFLYNRTNKSSGVQDQPRSTYSGPYRNTTHPESGAIYFGIPVFSYEELQEATNNFDQARVLGEGGFGIVYYGKLRDGREVAVKRLLERNYRPVESFINEIQILTRMRHRNLVTLYGCSSRHSRELLLVYEYVPNGTVSCHLFGDKAKHGLLPWPVRMKIAIETASALAYLHASDIIHRDVKSSNILLDNNFGVKVADFGLSRLFPHDVTHVSTAPRGTPGYVDPDYRLCYQLTIKSDVYSFGVVLVELISSLPAVDMNRDSNEINLAKLAIRKIQRRAFCELIDPSLGCQTDGQLKKMIISVAELAFQCLQGDKELRPSMDEVLEVLQRIESGKDEPGNLEGIEVHGAGVSQSYAHPSLPNTLMKPQRHHQTV* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00455 585 Gene3D Phosphorylase Kinase; domain 1 241 343 - -
Rops1g00455 585 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Rops1g00455 585 FunFam receptor-like protein kinase FERONIA 233 343 - -
Rops1g00455 585 Pfam Protein kinase domain 268 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00455 585 ProSiteProfiles Protein kinase domain profile. 267 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00455 585 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 128 574 IPR044652 GO:0004672
Rops1g00455 585 CDD STKc_IRAK 273 542 - -
Rops1g00455 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Rops1g00455 585 SMART serkin_6 267 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00455 585 MobiDBLite consensus disorder prediction 566 585 - -
Rops1g00455 585 Gene3D Transferase(Phosphotransferase) domain 1 344 548 - -
Rops1g00455 585 FunFam Wall-associated receptor kinase-like 20 344 551 - -
Rops1g00455 585 SUPERFAMILY Protein kinase-like (PK-like) 245 543 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00455 Rops-Chr1 11928481 11931670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00455 181 544 Receptor kinase-like Gene Family AT1G25390 59.892 6.91e-146 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops1g00455 Pkinase 9.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00455 - - lang:109360621 587.03