Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00437 ATGAGGGAGATGTTTTGGAAGGAGAGTGATAGTAGTAACGGCTACGAGCAGCAGCCAACGGGAGGAATGGGGTTCAGCCAGAGCCAGAGCCACAGATACAGAGAGCGAGTCCGTCGTGGCACTCGCAGGTCACGTGCTTCTTCCACTTCTACTTCCCTTAGGGTTTCTGATTCCGACCAACCTCAACCTCATCATCGACCTCCTTGCACCGACTTCGACATGGCCTATTTCCATTCCTACTCTCACCTTGGTATCCACCAAGAGATGATCAAGGATCGTGTGCGGACTGAAACTTATAGAGAAGCAATCATGCGGCATCAGAGTTTTATTGCAGGCAAAGTTGTTGTTGACGTTGGATGTGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCAGGTGCAAAGCGGGTGTATGCAGTTGATGCCAGTGACATTGCCCTGCAGGCAAATGAAGTTGTTAAAGCAAATAACCTGTCTGATGTTGTTGTAGTATTGCATGGACGAGTCGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGCGGTCTTATTCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACACATACTGACAGATACAGTGACAGCATCGACTTCTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCGTTTGAGGAACCTTCTGTGGAGACAATAACTGGTGAAAATGTTTTGACTTGGCCTCATGTGGTAAAATATGTTGATAGTTATTCTGTTACCATCCATGAGTTAGAAACTGTAACAACAAAGTTTAAGTTCAACTCAATGATGCGAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAGTTTAATGGGCCTGCAATAGTACCAACCAATTATCATTCGTCAACATCATTTATCGAGAATCATCAGGTGAATGGTAGTCAGAGAAAAAAGCGAACAAATCCAAATGAAGCACTTGTCCTGTCCACTGCACCTGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTCTATGATCCTATAGAGTTGGAACAAGATCAACTAATCGAAGGTTCAGTGACATTATCGCAAAGCAAAGAAAATGCTCGATTTATGAATATTCACCTTGAATATACTTCAGGTGGTCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1275 0.4345 MREMFWKESDSSNGYEQQPTGGMGFSQSQSHRYRERVRRGTRRSRASSTSTSLRVSDSDQPQPHHRPPCTDFDMAYFHSYSHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSATLYMAPVTHTDRYSDSIDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENVLTWPHVVKYVDSYSVTIHELETVTTKFKFNSMMRAPLHGFAFWFDVEFNGPAIVPTNYHSSTSFIENHQVNGSQRKKRTNPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQLIEGSVTLSQSKENARFMNIHLEYTSGGRSYVKESVMR* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00437 424 MobiDBLite consensus disorder prediction 1 69 - -
Rops1g00437 424 Pfam Ribosomal protein L11 methyltransferase (PrmA) 111 185 - -
Rops1g00437 424 Gene3D - 217 423 - -
Rops1g00437 424 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 44 412 IPR025799 GO:0016274|GO:0018216
Rops1g00437 424 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 414 IPR029063 -
Rops1g00437 424 Gene3D Vaccinia Virus protein VP39 70 215 IPR029063 -
Rops1g00437 424 FunFam Protein arginine N-methyltransferase 6 69 215 - -
Rops1g00437 424 FunFam Protein arginine N-methyltransferase 6 217 422 - -
Rops1g00437 424 CDD AdoMet_MTases 115 214 - -
Rops1g00437 424 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 73 424 IPR025799 GO:0016274|GO:0018216
Rops1g00437 424 MobiDBLite consensus disorder prediction 10 30 - -
Rops1g00437 424 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00437 Rops-Chr1 11567640 11581270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00437 76 391 C2H2 Transcription Factor Family AT3G12270 38.671 1.62e-66 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00437 K11437 - gmx:100809174 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00437 1 11567640 11581270 Rops1g00437 1 11567640 11581270 ECH