Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00418 ATGGAATGGTTCTATTATAACATCATAATAAAGGAATCTCTGCAGACCATTGAACCGGGATGTAAGGAGCTTAAAAGCAAGAGTGTCTTTGTGAAGTTTCTTGAAGCAGTGCTTAGGGCAGGAAATCGCATGAATGCAGGAACTGCAAGAGGTAATGCTCAAGCTTTCAACTTGGAATCTCTTAGGAAACTCTCTGATGTCAATAACACCAATGGAAAAACCACATTACTTCACTTTGTGGTTGAAAAAGTAGTCCGTTCTGAAGGAAAACGTATTGTTCTTAACCGCAGTGGCAGCCTAAGCCGTAACAGTAGTAGTAGGAATAGTAACATGAATGAAAATCGGGTTGGGTTCTAA 357 0.4006 MEWFYYNIIIKESLQTIEPGCKELKSKSVFVKFLEAVLRAGNRMNAGTARGNAQAFNLESLRKLSDVNNTNGKTTLLHFVVEKVVRSEGKRIVLNRSGSLSRNSSSRNSNMNENRVGF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00418 118 Pfam Formin Homology 2 Domain 10 86 IPR015425 -
Rops1g00418 118 SUPERFAMILY Formin homology 2 domain (FH2 domain) 9 90 - -
Rops1g00418 118 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 118 IPR015425 -
Rops1g00418 118 Gene3D Formin, FH2 domain 9 110 IPR042201 -
Rops1g00418 118 MobiDBLite consensus disorder prediction 96 118 - -
Rops1g00418 118 PANTHER FORMIN-RELATED 10 106 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00418 Rops-Chr1 11089597 11089953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00418 5 106 FH2 protein (formin) Gene Family AT1G70140 65.714 7.81e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00418 - - gmx:100783219 142.124