Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00388 ATGTTATTTCTTCTTCCTTTCTTCCAATGGTGGCACCACCACAGGAACAAACGTTTGCCTCCTGGTTCCATGGGTTGGCCTTACCTTGGAGAGACCCTCAAGCTCTATACCCAAAACCCAAATTCCTTCTTCTCCAAAAGGCAAAAACGGCATGGAGATATATTCAAGACTCACATACTTGGTTGTCCTTGTGTGATGATATCAAGTCCCGAAGCAGCTAGAATTGTGCTAGTGACACAAGCACATCTGTTCAAGCCGACTTACCCTCCAAGCAAAGAGAAGATGATAGGACCAGAGGCTTTGTTCTTTCAACAGGGTGCTTATCACTCCGTGCTCAAGAAGTTAGTTCAGGCCTCATTTTTACCTTCCACTATTAAGAATTCAGTCTCTGAGGTTGACCAAATTGTCTGCAAAATGGTGCCAACTTGGGCCAATAGAACCATCAACACCTTGCAAGAGATGAAAAAGTATGCTTTCGAAGTAGCTACTATCTCGGCCTTTGGTGAAATAAAGGAGCTGGAAATAGAAGAAATAAGAGACCTGTATCGTTGCTTGGAGAAGGGCTACAACTCCTATCCTTTGCATCTTCCTGGAACTTCCTATTGGAAAGCAATGAAGGCAAGGAAGCTTCTGAATGAGAGTATAAGGAGGATAATAAAAAGAAGAAAGGAAAGCAAGAACAATGGTGGGGGGTTGTTGGGAGTTTTGTTACAAGCAAGAGGTCACAAGAAGATATATGAGCTCACTGACTCTCAGGTTGCTGATAATCTCATAGGTGTGATCTTTGCAGCTCATGATACTACAGCAAGTGCTCTAACATGGGTTCTCAAGTACTTGCACGACAATGTCAATCTCTTGGAAGCTGTGACGAAAGAACAAGAAGGAATAAAAATCAAACTAGCTGCGGAAAATCGTGGACTTTCGTGGGATGATACCAGGAAGATGCCGTTTACTAACCGGGTAATCAAAGAAACATTGAGAAGTGCAAGCATATTATCATTCACATTCAGAGAAGCAGTGACAGATGTTGAGCTGGAAGGCTACTCTATTCCCAAAGGTTGGAAGGTCCTTCCACTTTTCAGAAGCATTCATCACTCTGCTGATTTCTTCCCTCAGCCAGAAAAGTTCGACCCTTCAAGATTCGAGGTGCCACCGAGACCAAACACATATATGCCATTTGGAAATGGAGTCCACTCTTGTCCCGGTAGTGAGCTGGCTAAGCTTGAAGTTCTTGTCCTCCTCCATCACCTCACTGTATCATACAGGTGGCAAGTAGTGGGAAATGAAGATGGAATACAATATGGTCCTTTTCCTGTGCCAAAACATGGATTACCAGTAAAGATAACCCCAAGAAACTAG 1359 0.4341 MLFLLPFFQWWHHHRNKRLPPGSMGWPYLGETLKLYTQNPNSFFSKRQKRHGDIFKTHILGCPCVMISSPEAARIVLVTQAHLFKPTYPPSKEKMIGPEALFFQQGAYHSVLKKLVQASFLPSTIKNSVSEVDQIVCKMVPTWANRTINTLQEMKKYAFEVATISAFGEIKELEIEEIRDLYRCLEKGYNSYPLHLPGTSYWKAMKARKLLNESIRRIIKRRKESKNNGGGLLGVLLQARGHKKIYELTDSQVADNLIGVIFAAHDTTASALTWVLKYLHDNVNLLEAVTKEQEGIKIKLAAENRGLSWDDTRKMPFTNRVIKETLRSASILSFTFREAVTDVELEGYSIPKGWKVLPLFRSIHHSADFFPQPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLEVLVLLHHLTVSYRWQVVGNEDGIQYGPFPVPKHGLPVKITPRN* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00388 452 FunFam Abscisic acid 8 9 450 - -
Rops1g00388 452 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 393 402 IPR017972 GO:0005506|GO:0016705
Rops1g00388 452 Pfam Cytochrome P450 20 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 Gene3D Cytochrome P450 11 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PANTHER CYTOCHROME P450 26 17 440 - -
Rops1g00388 452 SUPERFAMILY Cytochrome P450 10 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PRINTS E-class P450 group IV signature 315 331 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PRINTS E-class P450 group IV signature 400 418 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PRINTS E-class P450 group IV signature 384 400 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PRINTS E-class P450 group IV signature 42 65 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PRINTS E-class P450 group IV signature 254 280 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PRINTS P450 superfamily signature 391 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PRINTS P450 superfamily signature 263 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00388 452 PRINTS P450 superfamily signature 320 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00388 Rops-Chr1 10702972 10711243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00388 18 445 Cytochrome P450 AT3G19270 59.207 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00388 K09843 - gmx:100782541 810.831