Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00386 ATGAATCTCCACATTCCCTATCATCCCAACACCATGATGACCAATAGCGCTCTCAACCTCACCTTTGGCTACTCCTCCTCCCACATGGCTGCAGCCACAGGAAACTTGTTTTCCCACAGCCTCTTGCTCTTGCAAGATATCCAAATCCTTGAGTTCATCATAGCAGCCATGGTTTTCATAGCCATTCATTCTTTGAGGTCAAAGAAGCATCATGGCCTACCCATTTGGCCTGTCCTTGGAATGTTACCTTCCTTGGTCATAGGACTCAAAACCAACATGTATGAATGGATCACAGATATGCTTAACAATCAAAATGGGACGTTTAGATTCAAAGGGCCTTGGTTCACCAGCCTGAATTGCATTATCACCTCTGACCCTCGCAACTTGGAGCATCTTCTTAAAACCAAGTTCACTGTTTATCCTAAAGGAAAGTTCTTTAGGGACACAGTTTGTGACCTTCTTGGAGATGGTATATTCAGTGCAGATGATGAGACATGGCAGAGACAAAGGAAGACAGCAAGCATTGAGTTTCACTCCACAAAGTTCAGGCAACTAATAAATGAGTCACTGTTTGAGCTTGTCCACAAGAGGCTCATACCTGTCTTAGAGGCTTCTGCTCAGAAATCCATTGCCATTGACCTTCAAGATATCTTGTTAAGGCTTACTTTTGATAATGTATGTATGATAGCCTTTGGTGTTGATCCTGGTTGTCTGCAACCACACTTGCCTGAGATACCATTTGCCACAGCCTTTGAGGATGCCACAGAGGCCACTGTGCTTCGATTTGTCACCCCCATGTGTGTATGGAAGGCTATGAGGTTTCTCAACTTGGGAGTGGAAAGAAATCTGAAGAAATCAATAGAGAAAGTTGATGAATTTGCAAGGAATGTTATTACAACAAGAAAGAAGGAGCTATCTTTGCAACTTGAGAAAAATAAGCAAAAATCAGACTTGTTAACGGTGTTTATGAGGCTCAAGGATGAGAATGGACAAGCATATTCAGAAAAGTTCTTGAGGGATATCTGTGTGAATTTCATATTAGCAGGGAGGGACACTTCTTCAGTTGCTTTGAGCTGGTTTTTCTGGTTGCTTGATCAGAATCCTGCAGTGGAGGAAAGAATACTAGCAGATATTTGCAGGGTGGTGAGTCAGAGGGAAAACTTCAAGAAGGAAGAATTTGAAAATTCTTTGACATTTAGGCCAGAGGAGATAAAGAAAATGGACTATTTGCATGCTGCTCTTTCAGAAGCACTCAGATTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTGGTGGAAGATGACACTCTCCCAGATGGAACTCTCCTAAAGAAGGGAACAAAAGTGATCTATGCAATCTATGCAATGGGAAGAATGGAAAGTATATGGGGCAAGGACTACAAGGAGTTCAAGCCAGAAAGATGGTTAAGAGATGGCCGTTTCATGAGTGAATCTGCTTACAAATTCACTGCTTTCAATGGAGGACCACGTTTATGCATAGGCAAAGACTTTGCATATTATCAAATGAAATATGCTGCAGCCAGCATCATATATCACTACCGTGTGAAGGTGGTAGAGAATCACCCTGTGGTGCCAAAGCTTGCTTTGACTCTCTTCATGAAGCATGGATTGAAAGTTAATCTTCACAAGCGTCATGCAGCAGAGATTCAAAAATACTTGGAAGTTTAG 1689 0.4227 MNLHIPYHPNTMMTNSALNLTFGYSSSHMAAATGNLFSHSLLLLQDIQILEFIIAAMVFIAIHSLRSKKHHGLPIWPVLGMLPSLVIGLKTNMYEWITDMLNNQNGTFRFKGPWFTSLNCIITSDPRNLEHLLKTKFTVYPKGKFFRDTVCDLLGDGIFSADDETWQRQRKTASIEFHSTKFRQLINESLFELVHKRLIPVLEASAQKSIAIDLQDILLRLTFDNVCMIAFGVDPGCLQPHLPEIPFATAFEDATEATVLRFVTPMCVWKAMRFLNLGVERNLKKSIEKVDEFARNVITTRKKELSLQLEKNKQKSDLLTVFMRLKDENGQAYSEKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPAVEERILADICRVVSQRENFKKEEFENSLTFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDDTLPDGTLLKKGTKVIYAIYAMGRMESIWGKDYKEFKPERWLRDGRFMSESAYKFTAFNGGPRLCIGKDFAYYQMKYAAASIIYHYRVKVVENHPVVPKLALTLFMKHGLKVNLHKRHAAEIQKYLEV* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00386 562 Gene3D Cytochrome P450 58 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 FunFam Cytochrome P450 64 554 - -
Rops1g00386 562 CDD CYP86A 108 544 - -
Rops1g00386 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 492 501 IPR017972 GO:0005506|GO:0016705
Rops1g00386 562 Pfam Cytochrome P450 74 541 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS P450 superfamily signature 499 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS P450 superfamily signature 490 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 SUPERFAMILY Cytochrome P450 72 551 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS E-class P450 group I signature 499 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS E-class P450 group I signature 489 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS E-class P450 group I signature 411 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PRINTS E-class P450 group I signature 357 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00386 562 PANTHER CYTOCHROME P450 61 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00386 Rops-Chr1 10613886 10616323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00386 12 559 Cytochrome P450 AT5G23190 69.873 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00386 K15402 - gmx:100809503 904.049