Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00380 ATGGACATATTCAGTTACATCCTTCTCTTTCTCTTCACCTTCACCTTCTTCCAATGCCTTCGTTCACTATTTGCAAACAGAATCTACAACTTCAAGCGTCTTCCACCAGGCCCAGTTGGGCTTCCCATAATCGGAAACCTCCATCAACTGGGCCAAAAGCCCCACCAAACATTAGCATCTCTAGCCAAAATCCATGGCCCAATAATGACCCTAAAACTAGGCCAAGTAACCACCATTATCATGTCTTCATCTGAAACCGCCAAATCAGTTCTCCAAATCCATGACCAGTTCCTCTCCAACAGAAAAATCCCAGATGCCATGAAAGGTGCAAATCATGACCGTTACAGCTTACCCTTCATCCCAGTCTCACAACATTGGCGACAACTTAGAAAAATCAGCAACAACCTCTTATTTTCCAACAAAACTCTAGAAGCCAGTGAACAATTAAGACACAAGAAGGTTCTAGAACTTTCCATTGACATAAAAAACAGCATGTCAAAGGGAGAGGCTGTTGATATTGGAAGGCTTGCTTTCAAGACAACGATAAACTTGTTGTCAAACACTGTTTACTCGGAGGATCTTGTTAAGTCTGCGGACAAAGCTGGGGAGTTTAAGGAATTGGTGGCGAGTATTATGAAAGAGGTTGGAAGTGCTAACTTGTCGGATTGTTTTCCTTTGTTGAAGGTGGTGGACCCACATGGGATTAGGAGGAGAACTGGGGATTATTTTGGGAAGTTGTTGAGGATCTTTGAAGGGTTGGTGGATAAAAGGTTGAAGTTGAGGAGGGAAGAGAATGGTGGGTACTTGACCAAAAATGATATGTTGGATGCTATGCTTGATGATGCTGAAGGGAACAACAATAGTGGGGAAATCTATAAACATAAGATTGAACGTTTATCATTGGACTTATTTGTGGCAGGAACTGACACAGTTACATCTACAGTGGAATGGGCAATGGCTGAGTTACTTCATAACCCTGACATTATGTCAAAAGCAAAAGCAGAGTTGGAGAAAACAATTGGCAAAGGTAACTTGGTTGAAGAATCACATATTGGGAAACTCCCTTACTTGCAAGCAATAGTGAAAGAGACTTTTAGGTTGCACCCTGCAGTTCCATTTTTACTCCCAAGAAAAGCTGAAGTGGATCTTGAGATTCATGGCTACACAGTCCCAAAGGGTGCACAAGTGTTGGTTAATGTGTGGGCTATTGGCAGGGATCCCAATCTTTGGGACAATCCCACTTTGTTTTCACCAGAGAGGTTTTTGGGGTCAGAAATTGACTTTAAAGGTAGAAGTTTTGAGTTGACACCATTTGGTGCTGGAAGGAGAATATGTCCTGGCTTGCCTTTGGCAATAAGGTTGTTGTTCTTGATGTTGGGTTTGTTTATTAATTGCTTTGATTGGGAGCTTGATGGTGGAATCAAACCAAAGGATATGGATATGGAGGAGAAGTTTGGACTTACCTTAGAGAAGGCTCAACCTGTGTTAGCTATTCCAATCAAACCAAGCAATTAA 1515 0.4198 MDIFSYILLFLFTFTFFQCLRSLFANRIYNFKRLPPGPVGLPIIGNLHQLGQKPHQTLASLAKIHGPIMTLKLGQVTTIIMSSSETAKSVLQIHDQFLSNRKIPDAMKGANHDRYSLPFIPVSQHWRQLRKISNNLLFSNKTLEASEQLRHKKVLELSIDIKNSMSKGEAVDIGRLAFKTTINLLSNTVYSEDLVKSADKAGEFKELVASIMKEVGSANLSDCFPLLKVVDPHGIRRRTGDYFGKLLRIFEGLVDKRLKLRREENGGYLTKNDMLDAMLDDAEGNNNSGEIYKHKIERLSLDLFVAGTDTVTSTVEWAMAELLHNPDIMSKAKAELEKTIGKGNLVEESHIGKLPYLQAIVKETFRLHPAVPFLLPRKAEVDLEIHGYTVPKGAQVLVNVWAIGRDPNLWDNPTLFSPERFLGSEIDFKGRSFELTPFGAGRRICPGLPLAIRLLFLMLGLFINCFDWELDGGIKPKDMDMEEKFGLTLEKAQPVLAIPIKPSN* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00380 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Rops1g00380 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 16 501 - -
Rops1g00380 504 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 CDD CYP76-like 62 499 - -
Rops1g00380 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 FunFam Cytochrome P450 76C4 27 498 - -
Rops1g00380 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00380 504 Gene3D Cytochrome P450 24 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00380 Rops-Chr1 10463731 10466135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00380 1 501 Cytochrome P450 AT2G45550 47.451 9.14e-164 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00380 - - lja:Lj2g3v0039250.1 709.138