Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00361 ATGTTTGAAAGTGTTCCAAAGGGTGATGCCATTTTACTAAAGCTAGTATGCCATAATTGGGCAGATGAAGAGTGTATGAAGTTTTTAAGAAATTGCTACAAAGCTTTGCCACAACATGGGAAGGTCATTGTTTTAGACTATATAATGCCAGAAGTTCCCAATTCAAGCAGAATATCTAAGCATACTTGTGTTATCGACAATCTCATGTTTTTAGTAACAAGTGGAAAGGAGAGAACTGAGAAAGAATTTGAGAACCTATGCATGAGCTCTGGATTTTCTAGATTTCATGTTGCTTCCAGTGCTATCTCCGTTATGTCAGGAGTGATGGAATTTTATAAATAA 342 0.3596 MFESVPKGDAILLKLVCHNWADEECMKFLRNCYKALPQHGKVIVLDYIMPEVPNSSRISKHTCVIDNLMFLVTSGKERTEKEFENLCMSSGFSRFHVASSAISVMSGVMEFYK* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00361 113 Gene3D Vaccinia Virus protein VP39 2 99 IPR029063 -
Rops1g00361 113 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 113 IPR016461 GO:0008168
Rops1g00361 113 PANTHER O-METHYLTRANSFERASE 1 111 IPR016461 GO:0008168
Rops1g00361 113 Pfam O-methyltransferase domain 1 93 IPR001077 GO:0008171
Rops1g00361 113 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 100 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00361 Rops-Chr1 9916438 9916882 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00361 1 104 Monolignol Biosynthesis Gene Families AT5G54160 52.381 4.47e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00361 - K21553 aprc:113869089 203.756