Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00332 ATGTCAACGCAAATCATAAAGCCCTCTTCTGAGACCCCTCATCATCTCAAAGACTTCAAACTCTCCTTTCTTGATCAATTGTCACCATCTCAATACGTTCCAGTGCTTCTCTTCTACTCTGCACCTGATGTTAGTGGTTACGAAACTAGCTTTACATCCTTGTGTGACAAATTGAAGGCTTCCTTATCAGATGTGTTAACTCTTTACTACCCATTTTGTGGAAGAATCAAAGAAAATGTCTTAATTAATTGTAATGATTCAGGTGTGCTGTTTGTTGAGGCTAGAGTCTCCTCTCACCTCACTACCATCCTAGAGAATCCACAAGTCTATATGTTGAAACAGTTCCTTCCAATTGATCCATTTAAACCAAGAGCAGCCTGTATGAATGATGAGGAACCAGTTCTCATGGCGGTTCAAGTTAGTGAACTTAGTTGTGGTGCCATGGCACTTGGTGTGTGCATAACGCACAAAATTGTTGATGGTGTAGCAGTTGCCTCATTCCTCAATGCTTGGGTTGCAACAACAAAGGTAAATGACAATATAACCAAACCTCATATGGAAGCAAGTTTGTTATTTCCAACAAGAGAAAAGAATTTTTCTAATCCATTTAATGGTAATGTTGATAACAAAGAAGTTGTGACCACAAGATTAGTGTTTGATGGGACAAGCTTGTCTTTGCTAAAAGCTGAAATGGATGGCTATAATCCCACTAGGGTTGAAATTGTGACGGCTCTTATATGGAAATCAATGATGGAGGCAAACTTAGCAAGTTCAAGGGGGCAAAAACTTGTAAGATCCTTTGCAACACATATTGTGAATATTCGTAGTCGCATGGTGCCACCATTGCCTGAACGTAGCATAGGAAATTTTCTTCAATTTGCTTTTACTCCATTGGTTGAACTCCAAGAGGATAAAAAGTTTGAGTTGCAGGATTTGACAATGATGGTTAGAGAAGCAATAATGAGATTTGATGAAGATTATGTGAGTAAACTTGTAGGTGATGTTGGGTTTGATATAGTTATGGAATCCATAAAGCAAGTGATAACAAACTCTGAGGGCAATCAGTGGTGTAATTTTACTAGTTGGACAAGATTTCCTTTATATGAAGTTGATTTTGGATGGGGAAAGCCAACCTGGGTGAGTACTGTTAGTTTTCCTGTAAGAAATAATGTCGTTTTGATGGCCACAAAATGTGGGAAAGGAATAGAGGCATGGGTGAACTTGGATGAGCAGGACATGGTTGAATTTGAACGCAACCCAAAGCTTCAACAATATGCATCAATGTCACGTGCCTCTTGA 1299 0.3903 MSTQIIKPSSETPHHLKDFKLSFLDQLSPSQYVPVLLFYSAPDVSGYETSFTSLCDKLKASLSDVLTLYYPFCGRIKENVLINCNDSGVLFVEARVSSHLTTILENPQVYMLKQFLPIDPFKPRAACMNDEEPVLMAVQVSELSCGAMALGVCITHKIVDGVAVASFLNAWVATTKVNDNITKPHMEASLLFPTREKNFSNPFNGNVDNKEVVTTRLVFDGTSLSLLKAEMDGYNPTRVEIVTALIWKSMMEANLASSRGQKLVRSFATHIVNIRSRMVPPLPERSIGNFLQFAFTPLVELQEDKKFELQDLTMMVREAIMRFDEDYVSKLVGDVGFDIVMESIKQVITNSEGNQWCNFTSWTRFPLYEVDFGWGKPTWVSTVSFPVRNNVVLMATKCGKGIEAWVNLDEQDMVEFERNPKLQQYASMSRAS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00332 432 Gene3D - 1 201 IPR023213 -
Rops1g00332 432 Gene3D - 209 425 IPR023213 -
Rops1g00332 432 Pfam Transferase family 1 421 - -
Rops1g00332 432 PANTHER F21J9.9 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00332 Rops-Chr1 9040583 9041881 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00332 3 418 Monolignol Biosynthesis Gene Families AT5G48930 23.266 2.68e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00332 - K13065 gmx:100792323 365.155