Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00328 ATGGAAGCAAAATCTGAGATTATATCAAAGCAATTCATAAAGCCCTCTCCTGCAACCCCTCATCATCTCAAGGACTTCAAACTCTCCTTTCTTGATCAATTGTCACCATTTCAATACATTCCAGTTCTCCTCTTCTACTCTGCATCAAATGTCAATGGTTATGACACTGGCTTTAGATCTTTGTGTGACAAACTAAAGGCTTCCTTATCAGATGTGTTAACTCTTTACTACCCATTTTGTGGAAGAATTAAAGGAAATTCTTATATTGATTGTAATGATGCAGGTGTTCTTTTCATTGAGGCTAGAGTTTCCTCTCACCTCACTACCATATTAGATTATCCACAAGTCAATATGTTGAAACAACTACTTCCAATTGATCCATATGAGCAAGCATTTGATGATATTAACTATGAAGAACAAGTGATGATGGCAGTTCAAGTTAGTGAACTTAGCTGTGGTGGTGCGGTACTTGGTTTATGCATCTCACACAAGATTGCTGATGGTATAGCAATGGCCTCATTCCTTAATGCTTGGATTGAAACAACAAAGGAAAATGGAAACCCAATGAAACCTTATGTGGAAGCAAGTTTGCATTTTCCAACAAAAGATATCAAGTTTACTACTCCATCAGGTAGTGGTGTTGTTGAAAACAAAGAACTTGTGACCATAAGATTAGTGTTTGATGGGACAAGGTTGTCTAGGCTAAGAGTTGAAATGGATGGCTACACTCGGGTCGAAGCTGTGACAGCTCTTATATGGAAATCAATGATTGAGGCAAGCCTAGCAAGTCCAAGGGAACAAAAGCTTGAAAGGTCTTTTGCAGCACATATTGTGAATATTCGTAATCGAATGGAGCCACCATTGCCAGAGAATAGCATAGGTAACTTAATTCAATTTGTTGTTACTCCTTCGATTGAACTCCAAATGGGCAAAAATGTTGAGTTGCAGGATTTAGCATTGATGGTCAGGAAAGGAATAATGATACTTGATGCAAATTATGTGAGTAAACTTGTAGGTGATACTGGGTTTGACATGTTTATGGAGTATAGGAAGCTACAGATGCTTATGAACTCTGAGGACATTCAATGGTCTAAGTTTTCTAGTTGGACAAGATTTCCTTTATATGAAGCTGATTTTGGATGGGGAAAGCCAACTTGGGTGAGTACTATTTGTTTTCCTATAGAAAATAATGTCATTTTGGTGGCCACGAGATGTGGGAAAGGAATAGAGGGATGGGTGATCTTGGATAAGCAAGATATGGTTGAATTTGAATGCAACCCAACACTTCTACAATATGCATGTGTGTCACGAGCCTCTTCTTGA 1323 0.3832 MEAKSEIISKQFIKPSPATPHHLKDFKLSFLDQLSPFQYIPVLLFYSASNVNGYDTGFRSLCDKLKASLSDVLTLYYPFCGRIKGNSYIDCNDAGVLFIEARVSSHLTTILDYPQVNMLKQLLPIDPYEQAFDDINYEEQVMMAVQVSELSCGGAVLGLCISHKIADGIAMASFLNAWIETTKENGNPMKPYVEASLHFPTKDIKFTTPSGSGVVENKELVTIRLVFDGTRLSRLRVEMDGYTRVEAVTALIWKSMIEASLASPREQKLERSFAAHIVNIRNRMEPPLPENSIGNLIQFVVTPSIELQMGKNVELQDLALMVRKGIMILDANYVSKLVGDTGFDMFMEYRKLQMLMNSEDIQWSKFSSWTRFPLYEADFGWGKPTWVSTICFPIENNVILVATRCGKGIEGWVILDKQDMVEFECNPTLLQYACVSRASS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00328 440 Gene3D - 217 431 IPR023213 -
Rops1g00328 440 PANTHER F21J9.9 6 433 - -
Rops1g00328 440 Gene3D - 3 206 IPR023213 -
Rops1g00328 440 Pfam Transferase family 5 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00328 Rops-Chr1 8810357 8811679 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00328 4 424 Monolignol Biosynthesis Gene Families AT5G48930 25.055 6.23e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00328 - K13065 gmx:100792323 364.385