Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00303 ATGGGGAGGAATCCCAAGAAAACAGTCTCGACTCCAAACATGCCCCCAGGGCCATGGAAACTGCCAATTATAGGAAATATACACCATCTTGTTACGTCTACTCCACACCGAAAATTAAGGGACTTGGCCAAAATATACGGACCCTTGATGCATCTACAACTTGGAGAGATCTTCACAATTGTTGTTTCCTCACCAGAGTATGCCAGGGAGGCTGCGTTTGGCAAGAAATTCAAAGGCCAAGAAGAATTCATAACATTGGGAAAAGGAGAAGCAGTAGCAGGAGGTTTTGACATTGGTGAAATGTTTCCTTTTGCTAAATGGCTTCAACTTGTTTCTGGTTTGAGGCCTAAGCTTGAGAAGTTTCATAGAAAAATTGATGAGATGCTAGAAAACATCATCATCCAACACAAAGAGACAAAGTCAAAAGCAAGAGAAGGCCAAGGTGAAGCACAAGAAGATCTGGTAGATGTTCTCCTAAAATTTCAAGATGGTAGTGGTGGTAACAAGGACATTTGCTTAACTAATAACAATATCAAGGCTATAATCTTGATGTCAGGAGACATAACTTTGGTGATACATCATCGAGGGAAGTTACGTCGTGATGAAAATGGTCGTCTTGATTATGTCAACGGCGAGTTTGACTGTTGGGAAGATTTGGATATTGACACCCTCAATATGTTTATTTTGAGGGACTTATGTAAAGAACATGGATATCCGGGGGTTGAGAAGATGCATTGGTTGGTTCCGAAGAAGGATTTGGATAGCGGGTTACGGGAGGTGTGCAACGATGGTGACATAGTTGACATGTGTAATATGTCAACTCAAAACGATGGAGAGATACACCTCTTTGTGGAGCATCCAATTTCTAATCCGATTGTAGTTGAACAATTGAGTGACGATGATGTTGCAGGCAACGAAGGGGGTGCTGCGCCTGAGGTTGTTGCCATTCCAGATAGTGGTGATGAGGAAGATGTTGAGGGTGATGATGAGGAAGATGTTGAGGATGATGGAGATGATGATAGTGATGATGAGGAAGATGACGAGATGGAAGAAGAGGAGGGTGAGGATGAGGAAGAAGAGGAAGAGGAACAGGAAGAGGAAGAGGAGGGAACTGGTGGAGGGGAAACAGCCCATAGGGCTTCCTATGTACATGATATTGACGATGAGGATGGTGTGTTTGGGCCTAAAATGTATGATGATCTGAGTGATGGTGGGGACAGTTATGAATCTGAACAATTAGGAGAGCCTGTTAGTGATGATGATGAAGTTGGTGGAAGAGGACGGGTTTTTCCACAATTTGATGAGCAAGCACCTTTTGGGCATGTAAATCTAGAGGTTGGTATGGAGTTTGCAAATTTGGATGCATTTAAGAAGGCCATTAAGGATTATACTATTTACTATGGCCGAGAGATTAAATGGGTGAAAAATGATAAAGTAAGGTGCAGGGCCAAGTGTAACAATGAGCAATGCAATTGGTGCATTCTTTGTTCTTGGAGTAGTGCCACAAAAAGCTACCAAATCAAGACATTTGAAGATGTCCATACTTGTTGTAGGGGATTCAAGAACAAACAAGCTACTAGGAAGTGGGTAGTGGAGAAGATAGTTGCCAAGATGAGAGTCCACCCTACACTTAAGAGTGCTGAGGCTTATGAAATGCTGAAGCGTGAGTATGGTGTGCATGTTGATGACACCAAAGTTTTTAGAGCAATGAAGGAGGCCAGGATTTTGGTAGAAGGGAATGAGGCTGAACAATATGGGTTGGTTTATGATTACGCACATGAGTTGTTACGGAGCAATCCGGGATCCACTGTTAAAATTGATGTGATTCCAAATCCGGATGACCCTCCTACTTTTGAAAGGTTGTACATTTGTCTTGACGGCTGCAAGAAAGGGTTCAAGGCTGGATGCAGGCCACTTATTGGTTTAGATGGTTGTTTCCTTAAGGCGTATTATGGGGGACAACTGTTGTCAGCAGTTGGCCAAGATGCCAACAACCACATTTTTGTCGTTGCCTATGCTGTTGTGAATATCGAGAACAAGGACAATTGGAAGTGGTTCCTGACATTGCTATCAGAGGACCTTGGGGACCACATGCAACATGGGTGGAATTTTATTTCAGACATGCAAAAGGGGCTGATCCCAGCAATGCAGGAAGTCATCCCTGGGGCCAACCACAGGTTTTGTGTGATGCATCTGTGGAAGAATTTCACAAAACAATGGCGGGACAAAGAATTGAGGGGTTTTGTCTGGGAGTGTGCAAGAGCCACCACTCCACAACAATGGCAGACAAAAATGGATGAATTAAGGAGGTACCATCCATGA 2322 0.4341 MGRNPKKTVSTPNMPPGPWKLPIIGNIHHLVTSTPHRKLRDLAKIYGPLMHLQLGEIFTIVVSSPEYAREAAFGKKFKGQEEFITLGKGEAVAGGFDIGEMFPFAKWLQLVSGLRPKLEKFHRKIDEMLENIIIQHKETKSKAREGQGEAQEDLVDVLLKFQDGSGGNKDICLTNNNIKAIILMSGDITLVIHHRGKLRRDENGRLDYVNGEFDCWEDLDIDTLNMFILRDLCKEHGYPGVEKMHWLVPKKDLDSGLREVCNDGDIVDMCNMSTQNDGEIHLFVEHPISNPIVVEQLSDDDVAGNEGGAAPEVVAIPDSGDEEDVEGDDEEDVEDDGDDDSDDEEDDEMEEEEGEDEEEEEEEQEEEEEGTGGGETAHRASYVHDIDDEDGVFGPKMYDDLSDGGDSYESEQLGEPVSDDDEVGGRGRVFPQFDEQAPFGHVNLEVGMEFANLDAFKKAIKDYTIYYGREIKWVKNDKVRCRAKCNNEQCNWCILCSWSSATKSYQIKTFEDVHTCCRGFKNKQATRKWVVEKIVAKMRVHPTLKSAEAYEMLKREYGVHVDDTKVFRAMKEARILVEGNEAEQYGLVYDYAHELLRSNPGSTVKIDVIPNPDDPPTFERLYICLDGCKKGFKAGCRPLIGLDGCFLKAYYGGQLLSAVGQDANNHIFVVAYAVVNIENKDNWKWFLTLLSEDLGDHMQHGWNFISDMQKGLIPAMQEVIPGANHRFCVMHLWKNFTKQWRDKELRGFVWECARATTPQQWQTKMDELRRYHP* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00303 773 Pfam MULE transposase domain 640 735 IPR018289 -
Rops1g00303 773 Coils Coil 342 369 - -
Rops1g00303 773 Pfam MuDR family transposase 442 507 IPR004332 -
Rops1g00303 773 MobiDBLite consensus disorder prediction 301 423 - -
Rops1g00303 773 ProSitePatterns Transposases, Mutator family, signature. 707 731 IPR001207 GO:0003677|GO:0004803|GO:0006313
Rops1g00303 773 MobiDBLite consensus disorder prediction 317 370 - -
Rops1g00303 773 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 11 70 - -
Rops1g00303 773 Pfam Cytochrome P450 15 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00303 773 MobiDBLite consensus disorder prediction 380 396 - -
Rops1g00303 773 Gene3D Cytochrome P450 4 73 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00303 773 Gene3D Cytochrome P450 74 185 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00303 773 SUPERFAMILY Cytochrome P450 13 183 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00303 Rops-Chr1 8145642 8149562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00303 14 70 Cytochrome P450 AT2G45560 59.649 2.61e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00303 - - mtr:120579362 511.531