Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00290 ATGGATGAGAAAACCAAGAAGAAAAGGTCTGAGATTTACAGAAGCAATTTGGGAAGTAGTTTTGAGCTGGAGCCAAATGAAGGAAAGAAAAAGAAGCACAAGGAGAGAAAGAAAAAGCATGCAACTGATAAAATACTCCATTCAAATAAAACCCTTGAAGAAAATTGTACTGGCAAAGCAGCTGACAAACAAACCTGCTCTATTGAAGGGAATATTACTTTCATGCGGAATGGGAAAGAAGTGAGCCACATCAATAAGAGAAAGAAGAAAAAGGTGAGGAAAGACATTGAAGTGATGGATAGTAATATTGCTGATGATAAAGAAGTGCAGTTCTTGGATGAGAACCAACAAAGCAAGATGAAGAAAAGAAAAAAATATGATGATCCGTTAACTGGAATGCAAGAAATGGGTTTTTCAAAACCAAGCAAAAAAGGAAAAATGACAGAGGATAATGAATTAAAAAACAATGACGGTGATCTCCCTTTGGATAGAATCGACACCGGAAATGCTAATGCACATTCTCTTGTGGCTGAAGTTGATTTTCAAGGTAAGGGAATGGAGAAGAAGAAACTGAGTAAGATAAACAAAAGAACTGAAGATGAAGAGTATGAAACCAATGGAGGTGATCCATGTTTGGTCAAAAGCAATGTAGTTGATCTACCTTCGGTCCAAAGTAATGGTGATCAGCATTTGGTCAAAAGCAATGAAGGTGAAAATGATGACCAAGGCAAGAAGAAGAAGAAGAAGAAGAAACTGAGTGAAGAAAGCAAACATAAGGAGTATAACGAGTTTAAAAGCAATGAAGGTGAAGATGATGACCCAAGCAAGAAGACAAAGAAGAAGAAAAAACTAATTGGAGAAAGCAAACATAAAAAATATAATGAGTTTGGAAGCGATGAAGGTGAAGATGGTGACCAAGGCAAGAAGAAGAAGAAGAAACTGAGTGAAGAAAGAAAACACAAGGAGTATAACGAGTTTAATAGCAATGAAGGTGAAGATGATGACTCAAGCAAGAAGATGAAGAAGAAGAAAAAACTAATTGAAGAAAGCAAACATAAAAATAATGAGTTTGGAAGCGATGAAGGTGAAGATGGTGACCAAGGCAAGAAGAAGAAGAAGAAACTAAGTGAAGAAAGAAAACACAAGGAGTATAACGAGTTTAAAAGCAATGAAGGTGAAGATGATGACCCAAGCAAGAAGACAAAGAAGAAGAAAAAACTAATTGGAGAAAGCAAACATAAAAAATATAATGAGTTTGGAAGCGATGAAGGTGAAGATGGTGACCAAGGCAAGAAGAAGAAGAAGAAGAAACTGAGTGAAGAAAGAAAACACAAGGAGTATAACGAGTTTAATAGCAATGAAGGTGAAGATGATGACTCAAGCAAGAAGATGAAGAAGAAGAAAAAACTAATTGAAGAAAGCAAACATAAAAATAATGAGTTTGGAAGCGATGAAGGTGAAGATGGTGACCAAGGCAAGAAGAAGAAGAAGAAACTAAGTGAAGAAAGAAAACACAAGGAGTATAATGAGTTTAAAAGCAATGAAGGTGAAGATGATGACCCAGGCAAGAAGATGAAGAAGAAGAAAAAACTAATTGAAGAAAGTAAACATAAAGAATGTAATGAGTTTGGAAGCGATGAAGGTGAAGATGGTGACCAAGGCAAGAAGAAGAAGAAGAAGAAACTGAGTGACAAAAGAAAAATCAAGGAGAACAGTGAGTTTAATAGCAATAAAGGGGATCCACCTTTGGTTAGAGTTGAGTCAAGAGATGCTAATGCTCGATGCATTGTCACTGAAGTTAATGATCAAGGCAAGAAGATGAAGAAAAAAATGAAAGCTAAGGCAGGTACGGGTGAATCTCCTAGCCCTGCACGTGATGGATCATCCAAACCCAAACGAGTTACTTTTTCTGATCAAGTGGAGATTTGCGGTGATAGCTTAGTGCGTGGGAAAAGGTTTACACCAGAAGAAGATGAGAAGATCAAAGTGGCTGTTTTTGATTATATAGAGTCTCATGGTTTGGGAGATGAAGGTCTAGATATGATTCTGCATTGCAATTCTCATCATAAAATTAGGGATTGTTGGAAGGAAATTGCAGCAGCCTTACCTGAGAGGCCTCAAACTAGTGTGTATTCTCGCGCTCATATTATTTTTGAAAGGGATGAGAAGCATAAGTGGACACCTGATGAGCTTGAATTTATACAAAAGGTTCAGAAACAACATGGATCTGATTGGAAATCAATAGCTGAAGTCTTGGGTAAACATCGGTTTCATGTGAAGGATGCATGGCGTAGAATAAAGTCAACTGATACAAACAGAGGGCGATGGTCCCAAGAGGAGTATCAAAAGTTATTTGATTTAGTAAACCTGGATCTACGCTCGAGGGCTGCAGAGGATTATAGAAAGTCAAAACACGGTATGTTGCGAGATAATATCAGTTGGGAGGCAATTGCTAATGAATTCACTAGAACCAGTCAACGGTGCTGCAAAAAGTGGTATGAGCAATTAACATCACGTATGGTTGCTGATGGCGAATGGTGTGACACTGATGACTACCGCTTGCTAGATGCTTTATATACTTTGGATGCTTGCTGTATGGAGGAGGTAGACTGGGACAACCTGCTTGAGCAAAGGTCTGGTGATGTATGCAGGAAACGATGGAACCAAATGGTCCGATATATTGGAGAGCATGGAGGGAAGTCATTTGCTGAGCAGGTTGAAATTCTTGCAAAGAGATTTTGCCCCGATTTATTGGATGCAAGAGAGGCCTTTGATGGCAAACCTGTGATTTGTTGA 2796 0.382 MDEKTKKKRSEIYRSNLGSSFELEPNEGKKKKHKERKKKHATDKILHSNKTLEENCTGKAADKQTCSIEGNITFMRNGKEVSHINKRKKKKVRKDIEVMDSNIADDKEVQFLDENQQSKMKKRKKYDDPLTGMQEMGFSKPSKKGKMTEDNELKNNDGDLPLDRIDTGNANAHSLVAEVDFQGKGMEKKKLSKINKRTEDEEYETNGGDPCLVKSNVVDLPSVQSNGDQHLVKSNEGENDDQGKKKKKKKKLSEESKHKEYNEFKSNEGEDDDPSKKTKKKKKLIGESKHKKYNEFGSDEGEDGDQGKKKKKKLSEERKHKEYNEFNSNEGEDDDSSKKMKKKKKLIEESKHKNNEFGSDEGEDGDQGKKKKKKLSEERKHKEYNEFKSNEGEDDDPSKKTKKKKKLIGESKHKKYNEFGSDEGEDGDQGKKKKKKKLSEERKHKEYNEFNSNEGEDDDSSKKMKKKKKLIEESKHKNNEFGSDEGEDGDQGKKKKKKLSEERKHKEYNEFKSNEGEDDDPGKKMKKKKKLIEESKHKECNEFGSDEGEDGDQGKKKKKKKLSDKRKIKENSEFNSNKGDPPLVRVESRDANARCIVTEVNDQGKKMKKKMKAKAGTGESPSPARDGSSKPKRVTFSDQVEICGDSLVRGKRFTPEEDEKIKVAVFDYIESHGLGDEGLDMILHCNSHHKIRDCWKEIAAALPERPQTSVYSRAHIIFERDEKHKWTPDELEFIQKVQKQHGSDWKSIAEVLGKHRFHVKDAWRRIKSTDTNRGRWSQEEYQKLFDLVNLDLRSRAAEDYRKSKHGMLRDNISWEAIANEFTRTSQRCCKKWYEQLTSRMVADGEWCDTDDYRLLDALYTLDACCMEEVDWDNLLEQRSGDVCRKRWNQMVRYIGEHGGKSFAEQVEILAKRFCPDLLDAREAFDGKPVIC* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00290 931 MobiDBLite consensus disorder prediction 142 161 - -
Rops1g00290 931 MobiDBLite consensus disorder prediction 602 634 - -
Rops1g00290 931 ProSiteProfiles Myb-like domain profile. 768 836 IPR001005 -
Rops1g00290 931 MobiDBLite consensus disorder prediction 218 232 - -
Rops1g00290 931 MobiDBLite consensus disorder prediction 183 587 - -
Rops1g00290 931 MobiDBLite consensus disorder prediction 411 557 - -
Rops1g00290 931 Gene3D - 766 841 - -
Rops1g00290 931 MobiDBLite consensus disorder prediction 1 44 - -
Rops1g00290 931 Gene3D - 727 765 - -
Rops1g00290 931 SMART sant 722 769 IPR001005 -
Rops1g00290 931 SMART sant 772 838 IPR001005 -
Rops1g00290 931 SMART sant 649 720 IPR001005 -
Rops1g00290 931 SUPERFAMILY Homeodomain-like 822 895 IPR009057 -
Rops1g00290 931 CDD SANT 725 754 IPR001005 -
Rops1g00290 931 SMART EF-1_beta_acid_2 232 259 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 17 44 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 296 321 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 543 569 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 419 445 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 264 292 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 387 415 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 450 476 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 357 382 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 481 506 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 326 352 IPR018940 -
Rops1g00290 931 SMART EF-1_beta_acid_2 511 537 IPR018940 -
Rops1g00290 931 PANTHER GB|AAC33480.1 354 930 - -
Rops1g00290 931 SUPERFAMILY Homeodomain-like 723 784 IPR009057 -
Rops1g00290 931 MobiDBLite consensus disorder prediction 108 130 - -
Rops1g00290 931 MobiDBLite consensus disorder prediction 108 167 - -
Rops1g00290 931 MobiDBLite consensus disorder prediction 288 403 - -
Rops1g00290 931 ProSiteProfiles Myb-like domain profile. 718 767 IPR001005 -
Rops1g00290 931 MobiDBLite consensus disorder prediction 233 280 - -
Rops1g00290 931 Pfam Myb-like DNA-binding domain 726 784 - -
Rops1g00290 931 MobiDBLite consensus disorder prediction 183 204 - -
Rops1g00290 931 ProSiteProfiles Myb-like domain profile. 838 891 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00290 Rops-Chr1 7973300 7976095 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops1g00290 Myb_DNA-bind_6 3.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00290 - - gmx:100785842 706.057