Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00286 ATGATGGCTGGGGCTGCCATGTATGAACTGGTTCGTGTCAGTCGTGATCACCTCATCGGTGAAATCATTCGTTTGGAAGGCGATTCTGCTACTATTCAAGTCTATGAGGAAACAACTGGTTTAATGGTTAACGATCCTGTCTTGCGGAAGCACAAGCTAGGAAACATTTATTTGTGGACCTATGTATACAATATTGTCAGGGTCTCTTCAAGAGGAACCAGCAATTGCTCCAATGCTGCAAGTGACTCCATCAATGAGTCTTGCATAAAATCCTCAGAATCAGACGTCACAGATTGTTCAGAACCTTTACTTGTATCCAAGGAATTGATCGCCGAGGATGATGCAGATCAGTATGTGCAAACGTGTACTACATCTGAAGGAAATGATAAGGTGGCAGCTACATTTAACATGAAGATGCGTTTATGGTTGTTTCTGAAAAAGACTAATCTGAAGAAATCATTTGCTCCCTCAACTATTGGAGCGATTATTGGGTTTATACTTGGATTGGTCCCTCAGACAAGGAAGGTTTTGATTGGTGATGAAGCTCCACTACGTGTGATTCAGGACTTGGCTTCCTTCTTAGGGACAGGAATCTTCATTGTTAAATGGGCAGTTCAATTAGGCTCGGTGCAGTCAGATTCATTGTACCAGTTTGTTCTTCTGATTCAGTATGCAGTTCCACCCAAGGTTGTGAAAATCGAGATTCACCAATGA 714 0.4216 MMAGAAMYELVRVSRDHLIGEIIRLEGDSATIQVYEETTGLMVNDPVLRKHKLGNIYLWTYVYNIVRVSSRGTSNCSNAASDSINESCIKSSESDVTDCSEPLLVSKELIAEDDADQYVQTCTTSEGNDKVAATFNMKMRLWLFLKKTNLKKSFAPSTIGAIIGFILGLVPQTRKVLIGDEAPLRVIQDLASFLGTGIFIVKWAVQLGSVQSDSLYQFVLLIQYAVPPKVVKIEIHQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00286 237 Gene3D - 5 53 - -
Rops1g00286 237 PANTHER - 53 197 IPR045033 GO:0080162
Rops1g00286 237 Pfam ATP synthase alpha/beta family, beta-barrel domain 5 49 IPR004100 GO:0046034|GO:1902600
Rops1g00286 237 Pfam Membrane transport protein 53 196 IPR004776 GO:0016020|GO:0055085
Rops1g00286 237 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 2 52 IPR036121 GO:0046034|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00286 Rops-Chr1 7922762 7929227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00286 2 57 Primary Pumps ATPases(2) AT1G78900 74.242 3.10e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00286 K24139 - zju:107416002 166.392