Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00285 ATGGGGACAAAAGAGTCCAATAATTTTGGTACACCTTACAAATTTATGAAGCTTCAAGATGAAACTCTAAACAAACCTTTACAGCCACATTGGACTACTTTCATGCAGGCATATCAGAATTCTGGGTCAACTTCAACTCCCTTTTTAAATTCACATGCGGCTGATTCTTACTCATGTTACTATATGCAGCCAAATCAGGATGCTGCATTGGCTTTTTCGGAAATGGTACACAGGACTTATGGTGAACAAAACCAGGGTTCAAAAACAAGATGTGCCAGAAACTTTCAACCTGAAAGTTTAATAACTAAGGAATCAAAAGAAAATGGAAACAGATCTTCAATACCCAAAAATGACAGGGATGGAATGTCATGGAGTGCAGCAAGTGGAAGCAAGGGATCACCAGATGAAGGCCATGACACTAACAATGGTTTTCCTTCAACTAAGAAGCAGCAATCTAATACGGTGCTTGGAAATGAAAATTCAACCGTACTGAATCAGAATTTGGGCACAAGCCTCAACTCACCTGGCACCAAATCTACAAAACTGGAAGAGGATGAAATAAGAAAAAAGGAAAGAAAAAGACAGTCAAACAGGGAATCGGCTAAGAGATCAAGGATGCGGAGACAGCAAGAATGTGAAGAGCTACGTAAAAACAGGGACACTCTCAAGGATGAAAACTCCTCACTTAAACAACAGCTCATAAGGCTTTCTGAGGATTGTATTGAGCTCGGCAATGAAAACGATTCCATACAGGAAGAGCTAGTTAATATGTATGGACCTGAATCAATAGCTGATTTATTACCCATGAAGCCTGCCTGA 819 0.3993 MGTKESNNFGTPYKFMKLQDETLNKPLQPHWTTFMQAYQNSGSTSTPFLNSHAADSYSCYYMQPNQDAALAFSEMVHRTYGEQNQGSKTRCARNFQPESLITKESKENGNRSSIPKNDRDGMSWSAASGSKGSPDEGHDTNNGFPSTKKQQSNTVLGNENSTVLNQNLGTSLNSPGTKSTKLEEDEIRKKERKRQSNRESAKRSRMRRQQECEELRKNRDTLKDENSSLKQQLIRLSEDCIELGNENDSIQEELVNMYGPESIADLLPMKPA* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00285 272 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 250 IPR004827 GO:0003700|GO:0006355
Rops1g00285 272 Pfam bZIP transcription factor 188 246 IPR004827 GO:0003700|GO:0006355
Rops1g00285 272 SMART brlzneu 183 249 IPR004827 GO:0003700|GO:0006355
Rops1g00285 272 Gene3D - 187 242 - -
Rops1g00285 272 MobiDBLite consensus disorder prediction 81 210 - -
Rops1g00285 272 SUPERFAMILY Leucine zipper domain 189 243 IPR046347 GO:0003700|GO:0006355
Rops1g00285 272 Coils Coil 198 253 - -
Rops1g00285 272 MobiDBLite consensus disorder prediction 115 178 - -
Rops1g00285 272 PANTHER G-BOX-BINDING FACTOR 3-RELATED 26 260 IPR044827 GO:0003700|GO:0006355|GO:0043565
Rops1g00285 272 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Rops1g00285 272 MobiDBLite consensus disorder prediction 81 108 - -
Rops1g00285 272 MobiDBLite consensus disorder prediction 179 210 - -
Rops1g00285 272 CDD bZIP_plant_GBF1 190 240 IPR045314 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00285 1 266 bZIP Transcription Factor Family AT4G36730 29.703 1.35e-23 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops1g00285 bZIP_1 1.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00285 K09060 - gmx:102665715 300.441