LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops1g00265	ATGGCATATAGTTCTGATTGTACAAGGCTTCAGAAAAATTATGATGCTGATAAGATGGCTAGATTGATTACCCGTACAACTGCTTGTGTGCGCCATTCAGCAAGGCTTCAACCACGTATGAGCCAACTAATTTGTTTGCTGGACAATAATGAGCTTCTTGTTGGTTTCTCTCCCGAAATCAATGAAATGGAGATGCTTTCTGATTGTCAAGTAGATGAAAACCAGCTAATTAATGCAGCTAAGATGTCAGCTTGTACAAAAAAACCCATCACATGTGTGCCAAAGCTAAAGAGATCAGATCTTGATGCAGCATGTGAAGATTTTAGCAATGTTATTGGTACTTCTCCTATTGATACATTGTACAAAGGAAAATGGGGGTTATGTCCACACGGATTAACTTCTGCATTCATCATTAACCACCAGCAGAATTTTTGGATTATCTTTGTTCCTTTCCAGGCTTTCCCTGATGCATTGTTCTTCCCACAGACTCATATCTTCAGGCTCACTGATGACTTTCAAAGGAGAAAGCAAATTAGAAGGGTCAGCTCTCTGTTTCACAATGTGAGGGGAAACATATGTACTTCTTGGTGA	591	0.3959	MAYSSDCTRLQKNYDADKMARLITRTTACVRHSARLQPRMSQLICLLDNNELLVGFSPEINEMEMLSDCQVDENQLINAAKMSACTKKPITCVPKLKRSDLDAACEDFSNVIGTSPIDTLYKGKWGLCPHGLTSAFIINHQQNFWIIFVPFQAFPDALFFPQTHIFRLTDDFQRRKQIRRVSSLFHNVRGNICTSW*	197

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops1g00265	196	PANTHER	PROTEIN MALE DISCOVERER 2	82	124	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops1g00265	Rops-Chr1	7263276	7276282	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops1g00265	9	51	Trihelix Transcription Factor Family	AT5G38560	46.512	4.88e-06	44.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops1g00265	-		-	gmx:100792450	79.3369