Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00232 ATGGATCGTACTGGGAACACTGTTGGGCCAGGAATGGATATGCCAATCATGCATGATAGTGTTAGGTATGAGCTGGTACGTGATATTGGGTCTGGGAATTTTGGGGTGGCAAGGCTTATGAGGGACAAGTACACTGAGGAACTTGTTGCTGTCAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTAAGGCATCCCAATATTGTCAGGTTCAAGGAGGTTATACTGACCCCTACGCATTTAGCTATTGTAATGGAGTATGCTTCTGGAGGAGAGCTTTTTGAGCGAATATGCAATGCAGGACGGTTCGGTGAGGACGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCATCGTGATTTGAAGTTGGAGAACACATTGCTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGGTATTCAAAGTCCTCAGTGCTACATTCACAACCAAAATCTACAGTCGGTACCCCTGCATATATTGCTCCTGAAGTTTTTCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGGGGAACCTAAAAATTTCCAGAAGACAATTCATAGGATTATTAAAGTCCAGTACTCAATTCCTGATTATGTTCAGATATCTCCCGAGTGCCGTCACCTGATCTCAAGGATCTTTGTTGCAGACCCAGCCCAGAGAATAAGCATTCCTGAGATTAGAAACCATGAGTGGTTTTTGAAGAACCTTCCAGCTGATCTCATGGTTGAGAACAGCCAGTTTGAGGAGCCTGATCAACCAATGCAGAGCATTGAAGAAATCATGCAGATAATTAGTGAGGCTACAATTCCTGCAGCTGGAACTCAGTCTCTCAACCGGTATCTTACTGGTAGCTTGGATATCGATGATGAGGAAATGGATGAGGACCTAGAGACAGATCCTGATATTGATATTGATAGCAGTGGAGAAATAGTTTATGCCATGTAA 1086 0.4291 MDRTGNTVGPGMDMPIMHDSVRYELVRDIGSGNFGVARLMRDKYTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFGEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVFLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPGEPKNFQKTIHRIIKVQYSIPDYVQISPECRHLISRIFVADPAQRISIPEIRNHEWFLKNLPADLMVENSQFEEPDQPMQSIEEIMQIISEATIPAAGTQSLNRYLTGSLDIDDEEMDEDLETDPDIDIDSSGEIVYAM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00232 361 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Rops1g00232 361 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
Rops1g00232 361 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00232 361 PANTHER SERINE/THREONINE KINASE 22 309 - -
Rops1g00232 361 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00232 361 SUPERFAMILY Protein kinase-like (PK-like) 22 304 IPR011009 -
Rops1g00232 361 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Rops1g00232 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Rops1g00232 361 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00232 361 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Rops1g00232 361 FunFam Serine/threonine-protein kinase SRK2E 17 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00232 Rops-Chr1 6718795 6722983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00232 21 283 CBL-interacting serine-threonine protein kinases AT5G25110 44.727 1.07e-68 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Rops1g00232 Pkinase 5.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00232 K14498 - gmx:100804702 675.241