Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g00215 | ATGTCTTCCTTAAGTGCTTCATCATCATCAAACACCGCAATTCCCAAATGGAATCGCCAAGTTCTCTTAAACTTCGCAACAAGAGACGTTAGAGTGCATCATTTCATTGATACTCTCCATAAAGAACTAGCAACAATGACTGCAACCCTAACACGCTTAAGCCCCTTCGAAATTTATGAAGGAGAACTTGAAAAGTGGCCAGCGTTCTCAAATCTGCAAGAAATCGAAGGTTTCAGGGTTTCCATCGTTGTTTTCTCCGAAGAGTACGGTGATGATATCGGGTGTTTGCGGGTGCTGGAAAAAATTATGGAGTGCCAGAGAGTCAAGGGTCAGGTGGTAATTCCTGTGTTCTATGGCGTGGATATGTGGGATGTGCGCAAGCAAAAGGGTAAGTTTGGAGATGTTTTTGAACAGATGATAAAGATAATGTCGGTGAAGGAAGACACTCTGTTGAGTTGGAGAAGAGCCCTGGCCGAAGCTGCTTTCTTCCCCGGTTACTTTCCTAGTGATACTGTTTTGGATTGGGATGCTTTTGATGAAATAGACAAGGTAGTTGGGAATATTGTTGACATTGTTCGTATGATGCTAAATGGTAAATATTTGTTCCGCCCACGCCATCCAGTTGGGATAGATGTTCATGCGAAAGAAGTGTTTGACAGCTTGAGTTATAATTCCGAAAAAATTCACTTCATAGGAATATGGGGAAAGGAAGGAATTGGTAAAACATCCATTGCCAAAGTAATTTACAACAGCATGTGTCAGAGTTTTGAGGGTTCGAGTTTCCTAGCAAATATTAAGGATGTATGGAAGCAGGATAATGGCAAGGATTATCTACAAAATCAACTTCTTTCTGACATCAACAATCATAACACTGAAACCAAGAAAATGTTTTCTCATAAAGGGGCACTTGTAGTACTTGATGATGTGAGTAATACAGACCAACTGCAATCATTGTGTTTTGGACATGACTGGCTTAGATTTGGGAGTATAATATTGATTACAAGCAGAGAAAAGCATGTACTTGATCTCCTTAAATTGGACATTGAATATGAAATGCAGGAGATGGACTCAAATGAATCACTTGAGCTTTTTAGTTGGCATGCGTTTAAGCATTCTAGTCCAAGCAATAAATGGATTAAACACTCAACAAAAGCAATTTCTTACTGTGGAGGACTGCCACTAGCTCTTGAGGTTCTGGGCTCGTGGTTACTTGACAGAACAACATCAGAGTGGAGAAGTGTATTGAAGCTACTTGAAAGAAATCAAAGTAATGCAGTACAAGATATACTAAAAATGAGCTATGATTTTCTAGATGATAATGAGAAGAAAGTATTCCTTGAAATAGCTTGTTTCTATATCGGTAGGGACAGACACAGTATTACCCAATTATTAAATGGCAGTGGACTTGCTGCAGAAACTGGGATAAGTAAACTCATTGAACGGAGCCTTCTAAAGGTTGACAAGAATAACAAGGTTGAAATGCATGATTTGTTGCAAGAGATGGGAAGAAAAATAAATGATTTTAAGCCAAAATCCACATGGATCCACAATGTGTTCTTGAGTTTCAGAGGTGAAGACACTCGGAGGTCTTTTACCTCTCATCTCTGTGCCGCTTTACAAAATGCTGGTATTGAGGTTTACATGGATGACAAACTTGAAAGAGGAGAAAATATCTCATCCTCGTTGTTGCAAGCAATTGAATGTTCTCAAATTTCCATCATCATTTTCTCAATTAACTATGCTAATTCAAGATGGTGCCTTCAAGAGCTGGAGAAAATCATGGAGTGTCATCGAACTATTGGTCAAGAAGTTGTACCTGTATTCTATGGTGTGGAACCATCAGAAGTGCGTAACCAAATCGGTTCTTTTGGAAAAGCATTGGAAGGACTTATAAAGAGAAGCTCGGCGACAAAAGAGATGATTATCGGTTGGAAAAGAGCACTCACTGAAGCTGCAAACTTGTCTGGGTGGAATTTAAATAATTACAGAACTGAAGCAACAATAGCTATCAAGGGATTGGCTTTTAGTTTGCCAGAAAACAATGCTGTTATTTTCGAGACTAATGCATTTAAGAAGATGAAGAGACTCAGATTGCTTCAACTTGGTCATGTGAAACTCACTGGAGATTTTGAATATTTATCAAAAGACTTGAGATGGCTCTGTTGGCATGGATTTCCTTTAAAATACATGCCTGGGAACTTTAATCTGCAGAAGTTAGTCGCTATTGACTTAAAGTACAGCAATCTGCAATTAGTCTGGAAGGAGCCGCAGTTGCTTGATAGGCTGAAAATCCTGAATCTGAGTCATTCTCATTACTTAACACAAACCCCTGAGTTTTCAAGACTACCGAATCTTGAAAAGCTAGTGCTCAAAGATTGTCCAAAATTGTCAAAGATTCACTCAACAATTGGAGATCTGAAATATCTTATTCTGGTAAATTTGAAGGACTGTAAATCCCTCCCTCACCTCCCAAGAAGTTTCTATAAGCTGAAATCTCTGAAATCTCTTGTTCTTTCTGGCTGTTCAAAAATTGACAAGTTGGAAGAGGACATCCTGCAAATGGAAGCCTTGACAAGTCTAGTGGCAGATAACACTGCCATCACACAAGTGCCCCATTCTCTAGTGAGATTAAAAAATATCAAATATGTGTCTTTGTGCGGCTATGAAGGATTACCACGTGATGTATTTCCTTCGCTATTTTTGTCTTTAATGTCACCAACAAGTAATCCTATGTATAAAGTTTTTGGGAGCATTTCATCTACACTTCAAAGTCTTTCACTTGGTTTATCTGCCAAAAATCGTGCAGCATTGGAATTAAGACCAAGAACACCTCAGTTAACTTACATGGAGACTCCCACAAACTCCATTCACATTGCAAGGTCTGAAAATTTCTCCAGTGCTCTTGTTATTCAAGCCGGGGAGTGCGGCAAAGCCACAGATACTTCTGCAGAGAGTATTTCACAGGGATGGACTAATGATGGATCTGGTGAAAGTGACTGTTTTCCTGGGATGACTCTACGCATAATTTATTCATCTTCCCTTGTCGACCTGGCTTCTGAATGTGATCTTCTTAGTGTCTCGATAATAAATTACACAAAGAAGACCATTCAGTCCTACAAGCGAGACACAACAACTTCCCTCAATGATTTAGAATGGCAAGGATTGATGTCAAATCTTGAAACTGGTGATGATGTGGAGGTTGTTATAGTTTTGGGACATCGGTTTACTGTGAAGGAGACTGTAGTCCATCTAATATACGATGAATTAACCGATGACAAAATTGTGGAGTGTTCATCAGCACCAGACAAGGGTCAAATCTGA | 3321 | 0.393 | MSSLSASSSSNTAIPKWNRQVLLNFATRDVRVHHFIDTLHKELATMTATLTRLSPFEIYEGELEKWPAFSNLQEIEGFRVSIVVFSEEYGDDIGCLRVLEKIMECQRVKGQVVIPVFYGVDMWDVRKQKGKFGDVFEQMIKIMSVKEDTLLSWRRALAEAAFFPGYFPSDTVLDWDAFDEIDKVVGNIVDIVRMMLNGKYLFRPRHPVGIDVHAKEVFDSLSYNSEKIHFIGIWGKEGIGKTSIAKVIYNSMCQSFEGSSFLANIKDVWKQDNGKDYLQNQLLSDINNHNTETKKMFSHKGALVVLDDVSNTDQLQSLCFGHDWLRFGSIILITSREKHVLDLLKLDIEYEMQEMDSNESLELFSWHAFKHSSPSNKWIKHSTKAISYCGGLPLALEVLGSWLLDRTTSEWRSVLKLLERNQSNAVQDILKMSYDFLDDNEKKVFLEIACFYIGRDRHSITQLLNGSGLAAETGISKLIERSLLKVDKNNKVEMHDLLQEMGRKINDFKPKSTWIHNVFLSFRGEDTRRSFTSHLCAALQNAGIEVYMDDKLERGENISSSLLQAIECSQISIIIFSINYANSRWCLQELEKIMECHRTIGQEVVPVFYGVEPSEVRNQIGSFGKALEGLIKRSSATKEMIIGWKRALTEAANLSGWNLNNYRTEATIAIKGLAFSLPENNAVIFETNAFKKMKRLRLLQLGHVKLTGDFEYLSKDLRWLCWHGFPLKYMPGNFNLQKLVAIDLKYSNLQLVWKEPQLLDRLKILNLSHSHYLTQTPEFSRLPNLEKLVLKDCPKLSKIHSTIGDLKYLILVNLKDCKSLPHLPRSFYKLKSLKSLVLSGCSKIDKLEEDILQMEALTSLVADNTAITQVPHSLVRLKNIKYVSLCGYEGLPRDVFPSLFLSLMSPTSNPMYKVFGSISSTLQSLSLGLSAKNRAALELRPRTPQLTYMETPTNSIHIARSENFSSALVIQAGECGKATDTSAESISQGWTNDGSGESDCFPGMTLRIIYSSSLVDLASECDLLSVSIINYTKKTIQSYKRDTTTSLNDLEWQGLMSNLETGDDVEVVIVLGHRFTVKETVVHLIYDELTDDKIVECSSAPDKGQI* | 1107 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g00215 | 1106 | ProSiteProfiles | TIR domain profile. | 17 | 196 | IPR000157 | GO:0007165 | |
Rops1g00215 | 1106 | Pfam | NB-ARC domain | 213 | 435 | IPR002182 | GO:0043531 | |
Rops1g00215 | 1106 | ProSiteProfiles | TIR domain profile. | 514 | 674 | IPR000157 | GO:0007165 | |
Rops1g00215 | 1106 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 20 | 510 | IPR044974 | GO:0006952 | |
Rops1g00215 | 1106 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 512 | 674 | - | - | |
Rops1g00215 | 1106 | Pfam | TIR domain | 516 | 657 | IPR000157 | GO:0007165 | |
Rops1g00215 | 1106 | Pfam | TIR domain | 73 | 173 | IPR000157 | GO:0007165 | |
Rops1g00215 | 1106 | Gene3D | - | 196 | 349 | IPR027417 | - | |
Rops1g00215 | 1106 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 8 | 163 | IPR035897 | - | |
Rops1g00215 | 1106 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 192 | 446 | IPR027417 | - | |
Rops1g00215 | 1106 | PRINTS | Disease resistance protein signature | 389 | 403 | - | - | |
Rops1g00215 | 1106 | PRINTS | Disease resistance protein signature | 296 | 310 | - | - | |
Rops1g00215 | 1106 | PRINTS | Disease resistance protein signature | 828 | 844 | - | - | |
Rops1g00215 | 1106 | PRINTS | Disease resistance protein signature | 230 | 245 | - | - | |
Rops1g00215 | 1106 | SMART | till_3 | 18 | 163 | IPR000157 | GO:0007165 | |
Rops1g00215 | 1106 | SMART | till_3 | 515 | 654 | IPR000157 | GO:0007165 | |
Rops1g00215 | 1106 | SUPERFAMILY | "Winged helix" DNA-binding domain | 425 | 507 | IPR036390 | - | |
Rops1g00215 | 1106 | Gene3D | - | 513 | 671 | IPR035897 | - | |
Rops1g00215 | 1106 | Gene3D | - | 12 | 195 | IPR035897 | - | |
Rops1g00215 | 1106 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 512 | 657 | IPR035897 | - | |
Rops1g00215 | 1106 | SUPERFAMILY | L domain-like | 675 | 929 | - | - | |
Rops1g00215 | 1106 | Gene3D | Ribonuclease Inhibitor | 672 | 958 | IPR032675 | - | |
Rops1g00215 | 1106 | Gene3D | - | 355 | 438 | IPR042197 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g00215 | Rops-Chr1 | 6408808 | 6426670 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g00215 | 689 | 824 | WRKY Transcription Factor Family | AT5G45050 | 35.135 | 3.22e-15 | 79.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g00215 | - | - | lja:Lj0g3v0353669.1 | 796.578 |