Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00208 ATGGATCCTTGTAGCCCTGGTGTCAAAGATGCTGTGAAAGTATGCACTGATGTCGGTGTTACGGTACGCATGGTTACTGGAGACAACCTTCAAACAACAAAGGTTGCAGAAGGCCAACAAGCTCTCGAAGAGGAGTCTCTCACTAAAGTGGAGAGTGAAGTCAGACAAGAGTTGAAGCAAACACTTCAGGAGGATGATGAAAGAGCAAGATTACAGATTAGTGATAACAGTGACTCTGCTGTGATTGAAGACAAACTTGCATCTTGTTGCAATTCTTAA 279 0.4337 MDPCSPGVKDAVKVCTDVGVTVRMVTGDNLQTTKVAEGQQALEEESLTKVESEVRQELKQTLQEDDERARLQISDNSDSAVIEDKLASCCNS* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00208 92 SUPERFAMILY HAD-like 2 41 IPR036412 -
Rops1g00208 92 Gene3D - 1 91 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00208 Rops-Chr1 6240844 6243713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00208 2 60 Primary Pumps ATPases AT3G21180 48.438 1.12e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00208 K01537 - gmx:100817367 67.0106