Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00207 ATGTTCTCTTTTGTGGTTCCGCACTTTTCACCAGGGATGCTAGCCTTGCAAGGTCACATAGTCATTGATACTCATGTACAAAACTTGGCTGCATCTGGGGTTACCAATACCAACTATTCTGAAAGAAGCTCTGATGTTGTCACAATTCCAATAGTCTTGACTATTGATGGTACCAGCCTTGTATATATTCTTGACAATGAACTTGAAGAAGAGCTCTTCCGAATTGCTAGTAGACGTTCCATTGTTCTGTGTTGTCGAGTGGCTCCATTGCAAAAAGCTGGAATTGTTGCCCTTGTGAAGAATAAGACAAATGACATGACTCTAACCATTAGTGATGTGAAGCTGCAAGAGGACTTTTTCCCCTTTACTAAGCTTGGATCATTGGGTCCCATTCTATGA 399 0.4135 MFSFVVPHFSPGMLALQGHIVIDTHVQNLAASGVTNTNYSERSSDVVTIPIVLTIDGTSLVYILDNELEEELFRIASRRSIVLCCRVAPLQKAGIVALVKNKTNDMTLTISDVKLQEDFFPFTKLGSLGPIL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00207 132 Gene3D - 10 114 IPR023214 -
Rops1g00207 132 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 36 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00207 Rops-Chr1 6238415 6240697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00207 19 112 Primary Pumps ATPases AT5G04930 52.128 2.11e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00207 K14802 - gmx:100791888 113.62