Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00201 ATGGGTGTTGCCTCAGTGGAGTTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCGATATTGAGAGCTGGTCTTGCTCTTGCCGAACATGCATCATCCATCTTGCCAGCAACAAAAACCTATCATCTAGGTGGTACTATAGTAGCTGCCCTGAGTCTCTTAAAGGAACGTGGAGTTAGCAACAAGCAGATTAAAGTGATATCTGCTGTTCTTTGCCCCTCGACCCTTCAAAAGTCGAGTGAGCGAGTTCCACAGATTGGTCGGACAAAATTGAGTGCTTACATTGCCCAATTAAACAATGGTATTTTTATCTCTCAAAAGAAATTTGCTAGTGACATCTTGAAGAAATTCAGAATGGAAAATTCAAAACCAGTTTCCACACTCGTTGAAGAAAAATTGAAGCTGACAAGAGAAAATGAAGGCGCATGGGTGGATCCAACATATTACAAGAGTCTGATTGGAAGCCTCAGATATTTTACTGCAACTAGACCAGATATAGTCTTTGGAGTTGGTTTACTTAGCATATTCATGGAGAAGCCATACAATTTCCACTTCCAAGGAGCAAAGAAAATTCTACGATATGTCAAAGGTACTCTGACTGATGGAATATTTTATGTGGTAATAGTGATGTGA 633 0.406 MGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGGTIVAALSLLKERGVSNKQIKVISAVLCPSTLQKSSERVPQIGRTKLSAYIAQLNNGIFISQKKFASDILKKFRMENSKPVSTLVEEKLKLTRENEGAWVDPTYYKSLIGSLRYFTATRPDIVFGVGLLSIFMEKPYNFHFQGAKKILRYVKGTLTDGIFYVVIVM* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00201 210 PANTHER GAG-POL-RELATED RETROTRANSPOSON 86 205 - -
Rops1g00201 210 SUPERFAMILY PRTase-like 11 85 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00201 Rops-Chr1 5977163 5980997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00201 1 84 PRT Gene Family AT3G53900 50.413 2.88e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00201 - - ahf:112805446 161.77