Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00199 ATGTTAGAGACTGGAGCCTCATGTCCAATGAAAGAGGTGGATCATTTTCTTGATGATCCTAAATCTTCCGAACGCATAAAGCAACTAGAGCTGGAAATCAGAATTCTCCGTAAACTGCATCACCCCAACATTGTGCAGTATTATGGAAGTGAAATAGATGATGATCGATTGTACATATATATGGAGTATGTTCATCCTGGATCACTTCATAAGTTTATGCATGAACATTGTGGGGCTATGACAGAATCTGTAGTCCGCAATTTTACACGGCATATTCTATCTGGATTGGCATACTTACATAGTACCAAGACTATCCACAGGGATATCAAAGGCGCAAACTTGCTAGTTGATGCATCAGGCATTTTCAAGCTAGCACATTTTGGGGTGTCAAAAATTCTAACAGAGAAATCATATGAACTTTCATTGAAGGGCAGTCCCTACTGGATGGTTCCAGAGCTTATGAAAGCTGCCATAAAGAATGAATCAAGTCCTGACATTGCCATGGCCATTGATATATGGAGCTTAGGGTGCACCATCATCGAAATACTGACAGGAAAACCTCTTTGGGTGGACTTTAAAGGGACGGTTTTCATGCCTGATGTTACCAAGTGGGAGCTCTCCAAAGATGCTGGCATATATCATTTTCCAAGGGTTTCTTGTGCTGCAGCTTTTGCAGATGATGCAGATTTGGACCCCACTGTTGCTGGTAAGTTATCACGTCTTAGTATTCTAGACTAA 738 0.4133 MLETGASCPMKEVDHFLDDPKSSERIKQLELEIRILRKLHHPNIVQYYGSEIDDDRLYIYMEYVHPGSLHKFMHEHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGIFKLAHFGVSKILTEKSYELSLKGSPYWMVPELMKAAIKNESSPDIAMAIDIWSLGCTIIEILTGKPLWVDFKGTVFMPDVTKWELSKDAGIYHFPRVSCAAAFADDADLDPTVAGKLSRLSILD* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00199 245 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 3 196 - -
Rops1g00199 245 Pfam Protein kinase domain 10 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00199 245 SUPERFAMILY Protein kinase-like (PK-like) 10 196 IPR011009 -
Rops1g00199 245 SMART serkin_6 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00199 245 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00199 245 Gene3D Transferase(Phosphotransferase) domain 1 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00199 Rops-Chr1 5929126 5932311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00199 3 198 MAP Kinase Kinase Kinase AT5G66850 68.878 7.05e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops1g00199 Pkinase 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00199 - - gmx:100781764 346.28