Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00177 ATGCAACAAAAGCAGAAGCCAGTGTCACTACAAAACACCCATGTCAAGCTTCTCGCATTCGATTTCCTCTCACTCACTCACACCCCAACCCCTTCTTCTTCTTCTTCAGACACATTCTTCTACCGCAAAGGAATCCCAGTCTCACGCGCAGAAACCGTAGGCACAGTAATCCTTAGGGACCTCAAGCCCAACAAGTTCCTCAGGTTCGGCATCGACGACGGCACAGGCTGCATCCCATGCATCCTCTGGCTCAATCACCTCTCCTCCCCTCAGCTCGCCCGCCGCCGCTCTCCCGCCGACCTCCGCCTCCTCGCCGACGCCGCTGCACGCTCCGCCTCCATGGTGAAGGTGGGGGTGGTGGCCAGGGTGAGGGGGCGAATCAGCGCGTATAAGGGTTCGGTGCAGTTAACGGTTTCGGATGTAATGCTTGAGAAGGACCCCAATGGTGAGATATTGCATTGGCTCGATTCTATCAACTTGGCTCGTAACTGTTACAATCTTTTGCCACCCCTTTCCTCCTCTGCTTCTGCACCACCACCCAAGTAG 546 0.5568 MQQKQKPVSLQNTHVKLLAFDFLSLTHTPTPSSSSSDTFFYRKGIPVSRAETVGTVILRDLKPNKFLRFGIDDGTGCIPCILWLNHLSSPQLARRRSPADLRLLADAAARSASMVKVGVVARVRGRISAYKGSVQLTVSDVMLEKDPNGEILHWLDSINLARNCYNLLPPLSSSASAPPPK* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00177 181 Gene3D - 9 168 IPR012340 -
Rops1g00177 181 PANTHER REPLICATION PROTEIN A-RELATED 5 170 IPR040260 -
Rops1g00177 181 Pfam OB-fold nucleic acid binding domain 54 142 IPR004365 GO:0003676
Rops1g00177 181 SUPERFAMILY Nucleic acid-binding proteins 36 159 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00177 44 160 Core DNA Replication Machinery Family AT2G24490 26.496 5.05e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00177 K23312 - aew:130751254 179.104