Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00168 ATGTACGATTTTAGTGTCTTTAGGGATGGTTTTGATTCATGCTTTGAAAACTTGAAGTTAGTGTTACAAAGATACATTGAAAATAGTTTGGTCTTGAATATGGAGAAATGTCACTTTATGGTTGAGGAAGGAATTGTCTTAGGTCATGTGGTGTCTTGGAGAGGTTTCTACAGGAGGTTCATCAAGGACTTCTCCAAAATATCCCAACCTTTGTGCAAGCTTCTTCAAGGTGCTAAGGTGATTGTCTTCACTTATTATGTAGCTTTAAAGTATCTACTTGCAAAGAAAGAGGCCAAACCAAGGTTACTTCGGTGGATATTGTTTCTACAAGAGATTGATTTGGAGATCAAGGATAAGAAAGAAAATGAAAATATAGTGGCTGACCACTTGAGCTGGATAGTGACTGAAGAGGAAGGGTTGCCTATCAAGGAACGCTTCCTGGATGAGCACATTACGTCTCTTACCACTTTGGTGCCTTGGTATGTCGATATTGCCAATTACTTGGCTACCAAGGAACTCCCGGAAAGCTTGAATAAGGCACAAAGAGATAGACTCAAGACGAACCCCTACCTCGAAGATTTCATGAGTAGAGGAATCTTCACTCTGATGGTGATACCCCTCCTGTCGAAAGCCCCAACGACCAACACGGTCCTCGACTTACAAGACGCGTTGCAACGATTCTCTTTTGGTAACCTGTGCATGATTGCGTTCAACTTCGACCCTCGTAGTCTCCACGGTGATGGGACCTTTGGGAAAGAGCTTATGTGTGTGTTTGAGGATGCAGTTACGCCTAGTTCAGGGAGAACGGAAGACCCCAACAACAAGTATGAGGGATCATTGTTCCGTTCCATCGTGTCCGACGACATTGTCATAAACTTCATCCTTGCGGGACATGACTCCACATTTTCAACACTGAGTTGGCTCCTTTGGGTTTTCTCTTCAAAGCCACACGTGAAGAAGAAAATCCTCGATGAGGTCGACACGCTTCATTCTCGGAAAGTTGGAAGAAGGAACCCTGTTTCTGCTACGAGGAACCGAAGGAGATGCAGTACATACACGTTGCAGCTTCAGAGACAATGA 1080 0.4389 MYDFSVFRDGFDSCFENLKLVLQRYIENSLVLNMEKCHFMVEEGIVLGHVVSWRGFYRRFIKDFSKISQPLCKLLQGAKVIVFTYYVALKYLLAKKEAKPRLLRWILFLQEIDLEIKDKKENENIVADHLSWIVTEEEGLPIKERFLDEHITSLTTLVPWYVDIANYLATKELPESLNKAQRDRLKTNPYLEDFMSRGIFTLMVIPLLSKAPTTNTVLDLQDALQRFSFGNLCMIAFNFDPRSLHGDGTFGKELMCVFEDAVTPSSGRTEDPNNKYEGSLFRSIVSDDIVINFILAGHDSTFSTLSWLLWVFSSKPHVKKKILDEVDTLHSRKVGRRNPVSATRNRRRCSTYTLQLQRQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00168 359 PANTHER CYTOCHROME P450 287 330 - -
Rops1g00168 359 SUPERFAMILY DNA/RNA polymerases 2 124 IPR043502 -
Rops1g00168 359 Pfam Cytochrome P450 289 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00168 359 Gene3D - 51 131 IPR043128 -
Rops1g00168 359 Gene3D - 1 50 IPR043128 -
Rops1g00168 359 Gene3D Cytochrome P450 202 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00168 359 SUPERFAMILY Cytochrome P450 158 332 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00168 Rops-Chr1 5248798 5253936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00168 204 337 Cytochrome P450 AT3G56630 32.796 5.04e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00168 - - pvy:116141935 182.185