LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops1g00161	ATGTCTCTCTCCATCACCAACACCTTCTTCTTCTTGTTCTTGTGCCTCTTCTTTTGCAACCTTCAACCCTCAATTGCCCAACAAAAACTCTCATCCTTTAACATCTCACACTCCCCATGGCTTCCATCACAAAACAGAACCCTTCTCTCCCCAAACTCAAACTTCACTGCTGGCTTCTTTCCACTACCCAATTCACCAAATCTCTTCACTTTTTCTGTTTGGTTCTCAAAAGTCCCTCACACTGCAAATCCTGTTGTTTGGAATTCCACAATCAAAGTAAACAGCACTGGCTCCCTTGTAATCAACTCCAGAGGTGAGCTTCTTCTCCTTGGTAAACCCTTTCAAAATGCTTCTCCTGGTTCCAATTCCACACAGCTTGTTCTTCAAGACATTGGGAACTTGGTTTTTGGGAACTGGAGCAGCTTTGCAAATCCAACCAACACCATCTTGCCCAACCAAACTTTCAATGGAACAGAGCTTCTTTCTCTTAATGGGAAATTCAAGTTCAATGATTCTCAGTATTTGGTTCTCAATGACGACAATTCCACCTATGGCTCTGTGATATACTACACAACCCCAAATCTCTTGTTAAGCATGGATAATCTTGGGAAAATGAGCATGCAAGGTAACTCTTTTCTCACTTCTGATTATGGTGACTCCAGGTTGAGAAAAGTGGTTCTTGATGATGATGGGAATCTTAGAATCTATAGCTTCTACCCTGAGCAGAATAACAAGTGGGTTGTGGTTTGGAATGCAATATGGGAGATGTGCAAAATCAAAGGCAAATGTGGGCCTAATGCTATTTGCATGCCCAAAGAAGATTTGAATTCTTCTCCTGATTGTGTTTGCCCATCTGGGTTCAAGCCACTTCAAGGTGGTGCTGAAAAAGGTTGCACAAGGAAAATCCAACTTTCAAGAAACACCCAATTTATCAGGCTGGACTATGTGAACTATACCAGCAACAACCTTCCTAAACAAATTGATGCTGGGAACTTCTCAATCTGTGAATCCAGCTGCAAAACAGACACAAAGTGTCTTGGGTTTGGGTTCAAATATGATGGATCAGGCTATTGTGTTTTGCTACTAGGATCACAGCTTGAATTTGGTTACTGGTCACCAGGCACTGAGATTGCCTTTTTTATGAAAGTTGACCAAAATGAAAAGGAAGCCACCAATTTCATTGGCTTGACACAGGTGATGCAAACAACATGCCCTGTCAACATAAGCCTGCCACTACCACCAAAGGACTCAAACAGCACCCCAAGAAACATTGCCATAATATGCATCCTTTTTGCTGCAGAACTCATTGCTGGGGTGGCTTTCTTCTGGTCTTTCCTCAAGAGGTACATCAAGTATAGGGACATGGCCACCACACTAGGCCTTGAGCTTCTACCTGCTGGTGGCCCCAAAAGGTTCACATACTCAGAGATAAAAGCTGCCACCAATGACTTCTCCAACCTCATAGGAAGAGGTGGATTTGGAGATGTCTACAAAGGGGAGTTGCCGGACCACCGTGTTGTCGCCGTGAAGTGCCTGAAGAATGTCACCGGCGGTGATGCCGAGTTCTGGGCAGAGGTCACAATCATTGCAAGGATGCATCACCTCAACTTGGTTCGCTTGTGGGGTTTCTGTGCTGAGAAAGGTCAAAGGATACTTGTCTATGAGCACATCCCTGGTGGGTCATTGGACAAGTACCTATTCAAGTCCAAGTCTCTCAAGGGTGGTGATGGTGAATCTGATCCCAAAAATGGCCCAAACACACAAGGGAAACCTGTTTTGGATTGGAATATGAGGTACAGAATTGCTCTTGGAGTGGCAAGATCTATTGCATACTTGCATGAGGAGTGTTTGGAATGGGTTCTGCACTGTGATATCAAGCCTGAGAACATTCTCTTAGGTGATGATTTTTGTCCCAAGATATCAGATTTTGGGTTGGCCAAATTGAGGAAAAAGGAGGACATGGTGACCATGTCAAAGTGGAGAGGCACTCCTGGTTATATGGCTCCTGAATGGATCACTGCAGATCCAATTACCTCAAAGGCTGATGTGTATAGCTTTGGCATGGTGCTTTTGGAGCTTGTGAGTGGGGTGAGGAACTTTGAGGTCCAAGGTTCTGTGGTCAGAAGTGAGGAGTGGTATTTCCCAGGATGGGCTTTTGATAAGATGTATAAGGAGATGAGAGTGGAAGACATTTTGGATTGTGAGATTAGGAACTTTTATGATACTAGGGCCCATTTTGAATTGGTTAATAGGATGGTGAAAACTGCAATGTGGTGCGTGCAGGATAGGCCTGAGTTGAGGCCCACTATGGGCAAGGTGGCTAAGATGCTGGAAGGGACAGTGGAGATCATTGAACCCAAGAAGCCCACTGTATATTTCCTTGGAGATGAGTAG	2394	0.444	MSLSITNTFFFLFLCLFFCNLQPSIAQQKLSSFNISHSPWLPSQNRTLLSPNSNFTAGFFPLPNSPNLFTFSVWFSKVPHTANPVVWNSTIKVNSTGSLVINSRGELLLLGKPFQNASPGSNSTQLVLQDIGNLVFGNWSSFANPTNTILPNQTFNGTELLSLNGKFKFNDSQYLVLNDDNSTYGSVIYYTTPNLLLSMDNLGKMSMQGNSFLTSDYGDSRLRKVVLDDDGNLRIYSFYPEQNNKWVVVWNAIWEMCKIKGKCGPNAICMPKEDLNSSPDCVCPSGFKPLQGGAEKGCTRKIQLSRNTQFIRLDYVNYTSNNLPKQIDAGNFSICESSCKTDTKCLGFGFKYDGSGYCVLLLGSQLEFGYWSPGTEIAFFMKVDQNEKEATNFIGLTQVMQTTCPVNISLPLPPKDSNSTPRNIAIICILFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKAATNDFSNLIGRGGFGDVYKGELPDHRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEHIPGGSLDKYLFKSKSLKGGDGESDPKNGPNTQGKPVLDWNMRYRIALGVARSIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSKWRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFEVQGSVVRSEEWYFPGWAFDKMYKEMRVEDILDCEIRNFYDTRAHFELVNRMVKTAMWCVQDRPELRPTMGKVAKMLEGTVEIIEPKKPTVYFLGDE*	798

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops1g00161	797	SUPERFAMILY	Protein kinase-like (PK-like)	465	778	IPR011009	-
	Rops1g00161	797	ProSiteProfiles	Protein kinase domain profile.	482	781	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops1g00161	797	SMART	serkin_6	482	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops1g00161	797	CDD	STKc_IRAK	488	779	-	-
	Rops1g00161	797	Gene3D	Phosphorylase Kinase; domain 1	456	556	-	-
	Rops1g00161	797	SMART	blect_4	43	145	IPR001480	-
	Rops1g00161	797	Gene3D	Transferase(Phosphotransferase) domain 1	558	788	-	-
	Rops1g00161	797	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	620	632	IPR008271	GO:0004672\|GO:0006468
	Rops1g00161	797	FunFam	S-receptor-like serine/threonine-protein kinase	454	556	-	-
	Rops1g00161	797	PANTHER	OS07G0415500 PROTEIN	3	792	-	-
	Rops1g00161	797	SUPERFAMILY	alpha-D-mannose-specific plant lectins	86	156	IPR036426	-
	Rops1g00161	797	Gene3D	-	35	148	IPR036426	-
	Rops1g00161	797	ProSitePatterns	Protein kinases ATP-binding region signature.	488	510	IPR017441	GO:0005524
	Rops1g00161	797	Pfam	Protein kinase domain	486	772	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops1g00161	797	ProSiteProfiles	PAN/Apple domain profile.	298	384	IPR003609	-
	Rops1g00161	797	FunFam	Serine/threonine-protein kinase	557	788	-	-
	Rops1g00161	797	Pfam	S-locus glycoprotein domain	209	289	IPR000858	GO:0048544
	Rops1g00161	797	PIRSF	SRK	1	797	IPR024171	GO:0004674

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops1g00161	Rops-Chr1	4845257	4847900	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops1g00161	470	789	Receptor kinase-like Gene Family	AT4G18250	40.367	1.95e-76	259

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Rops1g00161		Pkinase	1.5e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops1g00161	-		-	lang:109325652	1274.61