Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g00160 | ATGATGGGGCAAAAAGATTGGCTTGATACCCTTTTGAGTAGCAGCTTTGGCTATTGTGAAGACCATCAAGACCTAAGGTTTAGTGAGAAGAATGTGTTCTGTATAGACTGTGCAGTTAGCTTGTGTAGGCACTGTAAGGAAGCTCATAACCTCCATGGAAGGTTTCAGATATACAAATATTGCTATCAGGATGTTGTCAGGCATTCTGAGATGCATAAGTATTTTGACTGCTCAAATATTCAGACTTATATATCCAATAATGACAAGATTGTGCATCTCAAACCCCGGCCTTCATTCAAAGACAGCAAACTAGCCAAAAGATCTAAACTTGCTAATCAAAGCCCTGAGCCTCAAGCCAAAGAAACCAAAATATCAACACCTTCAAAGTCAGGTGGTAATTGTGAAGAATGTGGGAAACATTTACAAGATGGGCGTAATAGATTCTGCTCCATTACATGCAAGATCTCAGTGCTTCCAGTGGAGCCCCAAAACCAAGGTCTTCCCATTCAAGGAAATGATAAACAAAATTCAGAAACTGAGTCATCAATCTCTGTAGCTGAGCCATATGAATGTGTTGAAAAAGTGAATTTCAGATTGCATCCAAGGAAAACCACCCCTCATAGATCTCCCATGTTTTGA | 639 | 0.3991 | MMGQKDWLDTLLSSSFGYCEDHQDLRFSEKNVFCIDCAVSLCRHCKEAHNLHGRFQIYKYCYQDVVRHSEMHKYFDCSNIQTYISNNDKIVHLKPRPSFKDSKLAKRSKLANQSPEPQAKETKISTPSKSGGNCEECGKHLQDGRNRFCSITCKISVLPVEPQNQGLPIQGNDKQNSETESSISVAEPYECVEKVNFRLHPRKTTPHRSPMF* | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g00160 | 212 | MobiDBLite | consensus disorder prediction | 108 | 132 | - | - | |
Rops1g00160 | 212 | Pfam | PLATZ transcription factor | 59 | 155 | IPR006734 | - | |
Rops1g00160 | 212 | ProSiteProfiles | Zinc finger B-box type profile. | 14 | 57 | IPR000315 | GO:0008270 | |
Rops1g00160 | 212 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 5 | 211 | - | - | |
Rops1g00160 | 212 | MobiDBLite | consensus disorder prediction | 163 | 184 | - | - | |
Rops1g00160 | 212 | MobiDBLite | consensus disorder prediction | 101 | 136 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g00160 | Rops-Chr1 | 4837942 | 4839766 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | PLATZ | Rops1g00160 | PLATZ | 2.2e-25 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g00160 | - | - | gmx:100820425 | 294.278 |