Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00099 ATGTTATTCTCAAGGAGCTGCACGGTTGCTGTGAATCTAGTTTTAGATGCAGGATACTCTGATGCAATGGTGACTGTGTCACCATCTTCTTTAGTGGGTACCTTATCAGATACACAAACTTCGAGTAGGAAAAGGGTTGCCTCTGGTTATGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAGAATAGGGAATCTGCTGCTCGGTCACGGGCTAGAAAACAAGCTTACACACAAGAACTGGAGATTAAAGTTTCAAGTTTAGAATACGAGAATGAAAGGCTTAAAAGACAGCATGAGATAGAGAGGGTGTTGCCAAGTGTGCCACCACCAGACCCTAAGCATCAGCTTCGCAGAACTAGCTCAGCTCCCCTTTGA 387 0.447 MLFSRSCTVAVNLVLDAGYSDAMVTVSPSSLVGTLSDTQTSSRKRVASGYVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSSLEYENERLKRQHEIERVLPSVPPPDPKHQLRRTSSAPL* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00099 128 Coils Coil 81 101 - -
Rops1g00099 128 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 61 76 IPR004827 GO:0003700|GO:0006355
Rops1g00099 128 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 56 101 IPR004827 GO:0003700|GO:0006355
Rops1g00099 128 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 127 IPR043452 GO:0003700|GO:0045893
Rops1g00099 128 Gene3D - 56 107 - -
Rops1g00099 128 SMART brlzneu 54 122 IPR004827 GO:0003700|GO:0006355
Rops1g00099 128 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 56 108 - -
Rops1g00099 128 CDD bZIP_plant_BZIP46 58 103 - -
Rops1g00099 128 MobiDBLite consensus disorder prediction 105 128 - -
Rops1g00099 128 SUPERFAMILY Leucine zipper domain 58 104 IPR046347 GO:0003700|GO:0006355
Rops1g00099 128 Pfam bZIP transcription factor 58 101 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00099 Rops-Chr1 2991205 2991591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00099 20 128 bZIP Transcription Factor Family AT3G56850 80.734 1.76e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops1g00099 bZIP_1 1.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00099 K14432 - gmx:100783666 184.496