Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00098 ATGCAACCGGTTTGCATGCAAACTTCACGTGAAAAAGAAAGAGCTCAAGTAAACTTGCCAAGGATCATCCATGGATCAAGGGAGTGGCTCGTGTGGCAAGAAGGAGAGACCTGCAATTACTTTAAACTTCCTCCTCCAGTTCTTTCTTCTGGCCCTTGTCGGGATTACAGCAAACTAAGGCTTCTACTTGCTTGGCCTGGACAACACATCCCCAACTTTTGCATCAGCAATACAAAACTCTGTCCCAGCAATTACATTTCTCATGGCAGCCGTACTCAGGATAGAGCAAGTGCGACTGAAGCGAAAGGATGGGATAGCAAAGGTGGCAGGAACCGCATTCTGTGTGGCTGGGGCAACCGTGATTACACTTTACAAGGGTCCAACTATATACAGCCCAGTTCCACCTCTAAACAAAGAACAACAACAACGCAGCCACGCTTATTTGAGTCACTCTCACCGGGAGATGCAAAGGGCAAGAAGCTGGACCCTTGGTTGCCTCTACCTCATAGGGCATTGCTTGTCGTGGTGCAGTTGGCTTGTGTTGCAAGCACTACCCTCAAGAAAGATACTCAAGCTTGGATTTTCCACTCTGGTGGAGAAGTTTTCACAATTTTATACGCTGGAGTGGTGGCATCTAGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTTGCTGTGTATCAACCTGTTCAGACTCTTGTTGTCGCTATTATGGCTTCCATTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGCATTGATCGTTGTGGGACTGTACCTAGTCTTGTGGGGTAAAAGTGAAGAGAAGAAGTTTGCAATGGAACAGCTTGCTATTACTTCCACTCCGGAGCATAGCAGCATCAGGTCCTCAAGCCATGCTAAAGCATCACTCACTCAGCCTCTACCCCTTCTCCCTCACCCTTCGTGGGCCCGTTGA 969 0.484 MQPVCMQTSREKERAQVNLPRIIHGSREWLVWQEGETCNYFKLPPPVLSSGPCRDYSKLRLLLAWPGQHIPNFCISNTKLCPSNYISHGSRTQDRASATEAKGWDSKGGRNRILCGWGNRDYTLQGSNYIQPSSTSKQRTTTTQPRLFESLSPGDAKGKKLDPWLPLPHRALLVVVQLACVASTTLKKDTQAWIFHSGGEVFTILYAGVVASRIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIVVGLYLVLWGKSEEKKFAMEQLAITSTPEHSSIRSSSHAKASLTQPLPLLPHPSWAR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00098 322 MobiDBLite consensus disorder prediction 130 149 - -
Rops1g00098 322 PANTHER WAT1-RELATED PROTEIN 172 286 IPR030184 GO:0016020|GO:0022857
Rops1g00098 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 277 - -
Rops1g00098 322 Pfam EamA-like transporter family 195 273 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00098 Rops-Chr1 2918808 2920513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00098 175 312 Nodulin-like Gene Family AT1G75500 69.014 3.17e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00098 - - gmx:100786714 206.838