Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00097 ATGGCTTCCACCAAGGAACGTGAAAACTTCGTCTACATCGCCAAGCTTGCTGAACAAGCTGAACGCTATGAAGAAATGGTGGATGCAATGAAGAATGTGGCGAAGCTACATGTTGAGTTGACGATTGAGGAGAGAAACCTTCTATCAGTTGGGTACAAGAATGTAGTGGGTGCTCGTAGGGCTTCATGGAGGATTCTATCTTCTATTGAGCAGAAGGGAGAAGCTGCATGCAAGCTACATGCACCGTGGCATGTTGGCGCATCAAACAGAGAGCTACACAGGCCCGGGAGTAGGGGCTACAGGCGTGCAGTTTTGGCTGCCCCAGCTTCATGA 333 0.4985 MASTKERENFVYIAKLAEQAERYEEMVDAMKNVAKLHVELTIEERNLLSVGYKNVVGARRASWRILSSIEQKGEAACKLHAPWHVGASNRELHRPGSRGYRRAVLAAPAS* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00097 110 Gene3D - 1 104 IPR036815 -
Rops1g00097 110 PANTHER 14-3-3 PROTEIN 7 76 IPR000308 -
Rops1g00097 110 Coils Coil 13 33 - -
Rops1g00097 110 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Rops1g00097 110 SMART 1433_4 7 110 IPR023410 -
Rops1g00097 110 Pfam 14-3-3 protein 14 76 IPR023410 -
Rops1g00097 110 SUPERFAMILY 14-3-3 protein 6 74 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00097 Rops-Chr1 2918438 2918770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00097 1 72 14-3-3 family AT2G42590 79.167 1.42e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00097 K06630 - gmx:547891 138.272