Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00063 ATGGGCAACAAAGACCCCAAGTTAGGTCATGCTTTCTGCAGGCACCATCTCCTCTTGCACCCGATGGCTGCCAAGTTCACGTGCAACACCATGCATGCACCCAACGAAGCACAACCTCTAGGTTTTAAAAGAGGAATGAGAAAGGGTGCTGAAGGGTTGAAGTCAATTGGTCGATCGCTTGAAGTGGGGGTATCTAGGGCAGTGTTTCCAGAGGGTCTTAAAGTATCAGAAAAGAAGATATTCGATCCTCAAGACAAATTTTTGCTCTCGTGGAACAAGCTTTTTGTTATCTCGGGCATTTTTGTGATGCGGATACGTAAGGTTCCATGGAAAGAGTCACAGTCAAAGGGTGTGAAGAATACCATTGCTTTGACTTCACATGAACGCCTCATATGGAAAGATGTACCTGGAATTATTTCCTCTTCGGACAAGGAAATTGCAGATCAATTATATGTCCAGCATGTTATGAAGCCATTGCTTGGTTCCAAGCATGTTGATGTTGGGATGCACATGCTGGTTACTAAGGAGTCCCTTGAGTCGGTTGAGAAGAATGTTACTAGTCAACGTCCTGCTGCGTGTTGA 582 0.4502 MGNKDPKLGHAFCRHHLLLHPMAAKFTCNTMHAPNEAQPLGFKRGMRKGAEGLKSIGRSLEVGVSRAVFPEGLKVSEKKIFDPQDKFLLSWNKLFVISGIFVMRIRKVPWKESQSKGVKNTIALTSHERLIWKDVPGIISSSDKEIADQLYVQHVMKPLLGSKHVDVGMHMLVTKESLESVEKNVTSQRPAAC* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00063 193 PANTHER INOSITOL POLYPHOSPHATE KINASE 1 102 191 IPR009286 GO:0005524|GO:0035299
Rops1g00063 193 Gene3D - 91 192 IPR043001 -
Rops1g00063 193 Pfam Inositol-pentakisphosphate 2-kinase 101 191 IPR009286 GO:0005524|GO:0035299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00063 Rops-Chr1 1724425 1725192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00063 19 135 Ion Channels AT5G57940 49.593 3.01e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00063 K05391 K10572 gmx:100127406 124.79