Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00004 ATGCACCACGAGGCTCTCCAAGAAGCTCTTCCAGGTGAACACGTGGGATCCAACGTGAGGAAGGTTGCATTCAGCAATGATCTCAAGCATGGTTTTGTGGCATCCAACTCAAAGGATGACCCTACCAAGGGAGCTGCCAAGTTCACGAGCTGTGTAATCAATGCAAGGAAATCTGCACCTGCCGAAGTTGTCCTCGTGCCACCCGAGGATGATTCGAAGATTGAGGAGGAGTTGCAGCACTTGCGTGGCATGCGGCAGCAACTTGGTGACACTTCCAATGGGATGTGGTCCAAACCAACGTTTAGGAGAAAACAAAGATTGTTTGTACCATTGGTCTTTCTAGTAACACCAAGGAAATGA 360 0.4917 MHHEALQEALPGEHVGSNVRKVAFSNDLKHGFVASNSKDDPTKGAAKFTSCVINARKSAPAEVVLVPPEDDSKIEEELQHLRGMRQQLGDTSNGMWSKPTFRRKQRLFVPLVFLVTPRK* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00004 119 Gene3D Translation factors 1 65 - -
Rops1g00004 119 PANTHER ELONGATION FACTOR 1 ALPHA 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00004 Rops-Chr1 311083 311814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00004 1 53 Eukaryotic Initiation Factors Gene Family AT5G60390 71.698 1.59e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00004 K03231 - gmx:100809327 98.5969