Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03991 ATGCCTAGTTCTTCTTGTTCTTGTGCACCACCTCCTATTACCATTCTCTCAAAATGCACTGTTATCCCTGAACAGAAGTCCACTCTGGGAGACCTCAAACTCTCTATCTCAGACCTTAACATGCTTTTCTGTCACTACATTCAAAAGGGTTGTCTCTTCACAACCCCATCTCTCCCTTCACAAACTCTCATCAACCACCTCCTCACCTCTCTCTCTCGCACACTCTCTCTCTTTCCCCCACTCGCCGGCCGTTTCAAAAATGATTCTGACGGTTACGTTTACATCACATGCAACGACGCCGGCGTCGATTTCATCCACGCCTCCGCCACTGAGCTAACCATCTCCGACCTCTTGTCCCCATCGGACGTTCCCCATGTCCTCCGGCAACTCTTCCCCTTCCACCGGAAAATCAGCTACACTGCACATTTCTCCCCAATCATGGCCGTTCAGGTCACCGAGCTCACCGACGGAGTCTTCATCGGTTGCGCCGTCAGTCACGCCGTCACCGACGGAACCTCCTTCTGGAACTTCTTCAACATCTTCGCCGATGTTTCCAGGGGAGTCACCACTGCCTCCTCCAGGCTCCCGGACTTCAGCCGGGAATCCATTCTCATCTCCAACTCCGTGCTACAGTTGCCGGAAGGTGAACTCAAGGTGACGTTCAATGCCGACGAGCCCTTGCGCGAGAGGATTTTCAGTTTCAGCCGTGAAGCCATTCAGGAGCTGAAAGCAAAAGTAAATCACCGGACGTTGCCGGAGGAAGACGACGCGGTTGAGTTGACGGGGAAGCTGAGTAACGACCCACAACAGAAAACGGTTACGAGAAACGGAATCTCAGAGATTTCGTCGTTTCAGTCACTGTGCGCGCTTACGTGGCGCTGTGTGACGCGCGCGAGGGAGTTGGAGGGAACCAAAATGACGACGTTCAGAATGGCGGTGAATGTTCGGCACCGTTTGGAGCCAAAGTTAGGGGACTACTACTTTGGGAACGCGATTCAGAGCTTTGCCACGTGTGCACCCGCAGGTGATGTTGTGAGTAGGGATTTACGGTGGTGCGCGGAGGAGTTGAACGAGAACGTGAGGGCGTACGATAGCTCCATGGTGAGGCGCGCCATAGAGGATTGGGAGCGTGAGCCAAGATGCTTCGACTTGGGGAACAAAGATGGAGCAACGTTGCAAATGGGAAGCTCTCCGAGATTCCCAATGTACGATAATGATTTCGGCTGGGGGAGGCCGCTGGCGGTGAGGAGCGGCGGAGCCAATAAGTTTGACGGTAAGATGTCGGCGTTGCCGGGGAGGGAAGGCGGCGGCGCCGTTGATTTGGAGGTGGTTTTGGCGCCACAATCGATGGCGCGGCTCGAGTCTGATCCTGAGTTCATGCGTTACGTGTCTCCTCAGCCATGA 1404 0.5449 MPSSSCSCAPPPITILSKCTVIPEQKSTLGDLKLSISDLNMLFCHYIQKGCLFTTPSLPSQTLINHLLTSLSRTLSLFPPLAGRFKNDSDGYVYITCNDAGVDFIHASATELTISDLLSPSDVPHVLRQLFPFHRKISYTAHFSPIMAVQVTELTDGVFIGCAVSHAVTDGTSFWNFFNIFADVSRGVTTASSRLPDFSRESILISNSVLQLPEGELKVTFNADEPLRERIFSFSREAIQELKAKVNHRTLPEEDDAVELTGKLSNDPQQKTVTRNGISEISSFQSLCALTWRCVTRARELEGTKMTTFRMAVNVRHRLEPKLGDYYFGNAIQSFATCAPAGDVVSRDLRWCAEELNENVRAYDSSMVRRAIEDWEREPRCFDLGNKDGATLQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKMSALPGREGGGAVDLEVVLAPQSMARLESDPEFMRYVSPQP* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03991 467 Gene3D - 13 214 IPR023213 -
Rops11g03991 467 Gene3D - 215 455 IPR023213 -
Rops11g03991 467 Pfam Transferase family 13 460 - -
Rops11g03991 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 15 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03991 Rops-Chr11 74296631 74298469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03991 70 454 Monolignol Biosynthesis Gene Families AT5G48930 28.502 6.67e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03991 - - gmx:100792476 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03991 11 74296631 74298469 Rops9g00865 9 14108458 14110200 PCT