Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03970 ATGGCCACTGCCGGCGCTGCCGCCACGTCATACTTCTTCGGCACCCATCTCAGCAAGACACCCTCAAATTCTGGAAGATTCCACGCCCTCTTTAACCTCCGCATCAAAAAAGCACCTCAGCCGAAGAAAAAGGAGGTGAAAGTGAAACCCGATGGTGAACGCCTCGTGTGGCTCCCGGGTGCTCAGCCACCGGAATGGCTCGACGGAACCATGATCGGTGACCGTGGGTTCGACCCATTTGGGCTCGCGAAACCCGCAGAGTACTTGCAATTCGACCTTGACTCGTTGGACCAGAACCTGGCGAAGAACGTCGCCGGCGATGTGATCGGAACCAGGGTCGAGGCCATTGAGGTAAAACCGACGCCGTTTCAGCCTTACAGTGAGGTTTTCGGGTTGCAGAGGTTCCGTGAGTGTGAGCTTATTCATGGGAGGTGGGCCATGTTGGGTGCTCTTGGTGCTTTAGCCGTTGAAGCTCTCACTGGTGTCGCATGGCAAGACGCCGGAAAGGTAGAGCTGGTAGAAGGGTCATCCTACCTGGGACTTCCTCTTCCATTCTCATTGACCACATTAATCTGGATTGAGGTGTTGGTGATTGGCTACATTGAGTTTCAAAGAAATGCAGAGCTTGACCCAGAGAAAAGGTTATACCCAGGTGGCCAGTTCTTTGATCCTCTGGGCTTGGCCAACGACCCTGAAGAGAAAGCCAGACTTCAATTGGCAGAGATCAAGCATGCCCGCTTAGCTATGGTGGTCTTCCTCATCTTTGCAATTCAAGCTGCTGTAACTGGAAAAGGCCCTATAAGTTTTATTGCCACCTTCAATAAGTGA 828 0.5254 MATAGAAATSYFFGTHLSKTPSNSGRFHALFNLRIKKAPQPKKKEVKVKPDGERLVWLPGAQPPEWLDGTMIGDRGFDPFGLAKPAEYLQFDLDSLDQNLAKNVAGDVIGTRVEAIEVKPTPFQPYSEVFGLQRFRECELIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGQFFDPLGLANDPEEKARLQLAEIKHARLAMVVFLIFAIQAAVTGKGPISFIATFNK* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03970 275 SUPERFAMILY Chlorophyll a-b binding protein 50 272 - -
Rops11g03970 275 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 31 271 IPR001344 GO:0009765|GO:0016020
Rops11g03970 275 Pfam Chlorophyll A-B binding protein 63 259 IPR022796 -
Rops11g03970 275 Gene3D Chlorophyll a/b binding protein domain 55 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03970 Rops-Chr11 73888753 73890799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03970 17 272 Chloroplast and Mitochondria Gene Families AT3G08940 74.219 3.37e-136 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03970 K08915 - gmx:100794604 464.536