Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03969 ATGGCTTCTTTGCCAACACTGTTCTTCTTTGTCACCATCACCTTCATCTTCTTTCTCTTCCTCCTCCGTCAATCCCGTTACCGGCGGCTCCGGCTACCTCCAGGGAGTCTCGGTTTTCCGTTCATCGGAGAGACCTTGCAACTCATATCTGCATACAAGAGTGACAATCCTGAACCTTTCATCGACCAACGAGTGAACCGGTACGGTCCAATCTTCACAACTCATGTTTTTGGAGAACCGACCGTGTTCTCGGCCGAACCGGAAACGAACCGGTTCATTTTGCTGAATGAAGGGAAGCTCTTTGATTGTAGCTACCCCGGTTCGATATCGAACCTTCTAGGGAAACACTCTCTTTTGCTCATGAAGGGTGCTCTTCATAAGAGAATGCATTCACTCACCATGAGTTTTGCTAACTCTTCCATCATCAAGGATCATCTTCTCTTTGATATAGACCGGCTCATCCGGCTCAACTTGGATGCTTGGACCGACCGGGTTTTTCTCATGGAAGAGGCCAAGAAGATAACATTTGAGCTGACCGTGAAGCAGCTTATGAGCTTTGATCCAGATGAATGGACCGAGAGTCTAAGGAAAGAGTATGTTCTTGTGATTGAGGGATTTTTCACACTCCCTTTTCCTCTCTTCTCCACCACCTACCGGAGAGCCATCAAGGCAAGAAGGAAGGTGGCAGAGGCACTAGCACTTATAGTGAGGCAGAGGAGAAAAGAGAGTGAGAAAAAGAATGACATGCTGGGGGCATTGTTGGCCTCCGGGGACCACTTCTCCGACGAGGAAATAGTGGATTTCATGTTGGCTTTGCTAGTCGCCGGTTACGAAACCACCTCCACCATAATGACTCTTGCGGTCAAGTTCCTCACTGAGACTCCTCAAGCCTTGGCACAGCTCAAGGAAGAGCATGACCAGATCAGAGCAAGGAGTGACCCAGAGGCAGCATTAGAATGGACAGATTACAAATCAATGGCATTTACTCAATGCGTTGTGAATGAGACATTAAGGGTGGCAAACATAATTAGTGGAATATTTAGGAGAGCAATGACAGACATTGACATAAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCGTCATTTCGTGCTGTACATTTGAATCCTGAACATTTCAAAGATGCCCGCACCTTCAATCCCTGGAGATGGCAGAATAACAAAGAAGCCACAAGCCCTGGGAATGTATATACACCATTTGGAGGAGGGCCAAGGTTGTGCCCTGGCTATGAGCTTGCCAGAGTTGTACTTTCTGTCTTCCTTCACCGCATTGTCACACGTTTCAGTTGGGTTCCTGCTGAGGAAGATAAGCTGGTGTTTTTCCCAACCACTAGGACGCAGAAGAGGTATCCTATTATAGTGAAGCGCAGAGAGGAGTCCAGATAA 1410 0.473 MASLPTLFFFVTITFIFFLFLLRQSRYRRLRLPPGSLGFPFIGETLQLISAYKSDNPEPFIDQRVNRYGPIFTTHVFGEPTVFSAEPETNRFILLNEGKLFDCSYPGSISNLLGKHSLLLMKGALHKRMHSLTMSFANSSIIKDHLLFDIDRLIRLNLDAWTDRVFLMEEAKKITFELTVKQLMSFDPDEWTESLRKEYVLVIEGFFTLPFPLFSTTYRRAIKARRKVAEALALIVRQRRKESEKKNDMLGALLASGDHFSDEEIVDFMLALLVAGYETTSTIMTLAVKFLTETPQALAQLKEEHDQIRARSDPEAALEWTDYKSMAFTQCVVNETLRVANIISGIFRRAMTDIDIKGYTIPKGWKVFASFRAVHLNPEHFKDARTFNPWRWQNNKEATSPGNVYTPFGGGPRLCPGYELARVVLSVFLHRIVTRFSWVPAEEDKLVFFPTTRTQKRYPIIVKRREESR* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03969 469 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Rops11g03969 469 PANTHER CYTOCHROME P450 26 28 439 - -
Rops11g03969 469 CDD CYP90-like 64 464 - -
Rops11g03969 469 Pfam Cytochrome P450 209 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 FunFam Cytochrome P450 90A1 22 465 - -
Rops11g03969 469 SUPERFAMILY Cytochrome P450 26 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03969 469 Gene3D Cytochrome P450 22 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03969 Rops-Chr11 73859519 73866625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03969 121 466 Cytochrome P450 AT5G05690 79.714 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03969 K09588 - gmx:100775886 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03969 11 73859519 73866625 Rops11g03969 11 73859519 73866625 ECH
Rops11g03969 11 73859519 73866625 Rops9g00838 9 12935952 12941339 PCT