Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03965 ATGGATGACCTAAATAACATGAGAGACAAAGTTGGAGGATGTTACGAGACATCTGTGTCTAATTACAATAAAATATGGCAAAGTGAAAGCGTCTTAGCATTCTACCTTCCTTCCTTTGCAGCCCAAGTTGCTTTCATGATTTTCTCCACTCGTTGTTTATACTACCTCTTTAGACCCCTCAATCAACCTCGCCTTGTCATTGAGATTTTGGTTGGTTTCCTGATGAGTCCAGAAATGCTTGGGGGAACCCGTGTTTTTGGAGTTGTGTCTCCTCTAAAATCAATCCTACCAACTGAAACCATAGCATATTTTGGACTCGTTTACTGTGTCTTCCTTGCTGGATTGGACATGAACTTAGAAACAATCCTACGTGCAAGAAAGAAGGCTACAAGCATTGCTGTTGCAGGCACTATAATTCCAATGATAATGGGTGGTGGAATGTATGCTTTTCTTCAGAGCATGTACAAGGCACCTCCTGAGTATTTGTCACGTTACAATAAAGCTGAATCATATATTTTCTGGACCTTAATTTATAGTGTCACAGGTTTTCCTATTGTTACTCAAATCCTTGCTGATCTCAAGCTTCTCTACACAGCTCTAGGGAGAGTGGCCTTAACAGCAGCCATGATGAATGACTTCTATAATTGGGTCACTTTTGCATTGTTGATTCCATTTGCCATTAATGCAGGAACTGCCATCTACGCAGTGATCAGCACCATAGTGTTTGTCCTTGTCTGCTTCATTTTCATACGCCCTTATTTGGTGCAGTTAATAATTCGCAAAACCAATCAGAATGAGTGGGACAATTACCAGTTGTTCTTTGTGGTTATGGGGGCTTTTGTTTCTTCAGCTATTACAGATCTTCTTGGGGCACACCCTGTTGTCGGGGCTTTGGTGTATGGAGTAATGATACCCCGTGGTAAATTTACTGAGATGCTGATAGAAAAGACAGAGGATTTTGGGGCTGTTTTTCTGGCTTCACTTTTCTTTGGTAGTTCTGGCATAAGACTCAGATTGTTCCATGTTATAGAAACGCAAGGTTGGATGCTGGTGGTGACAATGTTGCTCTTGTCTTGCATTCCAAAGATTTTAAGCACTGTAATAGTAACTCAATTCTATGGTATGTCACCTCTTGATGGTGTGGCTCTTGGAATGCTTATGAACACCAAAGGCATCTTACCATTAATAATGCTCAACATTGCATGGGACAAGCAGATTTTGAGTATGGAGTCCTTCTCAATTATGATGGCATCTGTTTTTATAATGACCCTAATGGTGCCTATTGTCATTAACGCCATGTACAAGCCAAGAAAGCTACATAAGCAAAATAAGCTAAGGACTATACAGAATTTAAAGGTTGAAGCAGAACTTCGAATTTTGGCTTGTGTCCACAACCCTCGCCAAGCCTCAGGAATGACCAACATCCTTGAGGCTTTGAATGCTAATAAACGTTCACCTTTACGTGTGTTTGCTCTTCAGCTTATTGAAATAACTGGAAGTACCACTTCCCTTTTGGCTGTACACATCAATCAGCCCAACCAACAACAGAATGGATCACAAGCACTCACCAAATCAGAACAAGACTTGGAAGACATCACCAATATTTTCCTAGAATGTGCTGGGGGGAATGAAAACACTAGAGTGGAGACCCTTGCTGCTGTATCCTCCTATTCAACCATTCATGAAGACATATACAATGTAGCACAAGAGAAACAAGCAACCTTGATTATCCTTCCTTTTCACAAGCAATCAAGCATAGAAGGTGTTCTAGAGATAACCAACAGCGCATTTAAGGACATAAACCAAAATGTCATGAGAGATGCACCTTGTTCTGTTGGAATCTTTGTTGATCGTGGTCTTGGTTCATTGTCCAAAGTCAACTTGCGTGTCCTTATGCCTTTTATTGGTGGCCCTGATGACCGTGAAGCCTTATCTGTTGCATGGAGGATGTCAAAGCATCAAGGGATTCAACTCTCTATGGTGAGGATTCTTTTGTGTGGGGGGGCTGCAGAAGTTGATACATCACCCCAGGTAGAATCTAAAGGACTGTTATCTGCAGTGGTAGACTATGAAAAGCAAAAGGAGTTGGATGAAGAGTATGTCAATGCATTTAGACTCAAGGCAGTGAACAATGAGGATAATATAACTTATTCAGAAAGAGAAGTTCATTCTCGTGATGATATTTCTGAAGTCCTTTATCAATTGGACCAAAATGGGTATGATTTGTACATTCTAGGACAAGGGTCTGGTAGGAACTCTTTGGTGTTGTCAGATTTGATGAAATGGACTGATTGCCCTGAACTTGGAGTCATAGGGGACATGGTGGCATCAAATGATTTTGGTTCATGCTCTTCATTACTTGTTGTACAACAATTTGGCTTTGGGGGAATGACATTTGAGACTTCTACCACTCAGCATCCTAGTGAAATGCCTGAAAACAATGATGGCTCTGGGCCACTTTTTGTGAAGATAGAATAG 2478 0.41 MDDLNNMRDKVGGCYETSVSNYNKIWQSESVLAFYLPSFAAQVAFMIFSTRCLYYLFRPLNQPRLVIEILVGFLMSPEMLGGTRVFGVVSPLKSILPTETIAYFGLVYCVFLAGLDMNLETILRARKKATSIAVAGTIIPMIMGGGMYAFLQSMYKAPPEYLSRYNKAESYIFWTLIYSVTGFPIVTQILADLKLLYTALGRVALTAAMMNDFYNWVTFALLIPFAINAGTAIYAVISTIVFVLVCFIFIRPYLVQLIIRKTNQNEWDNYQLFFVVMGAFVSSAITDLLGAHPVVGALVYGVMIPRGKFTEMLIEKTEDFGAVFLASLFFGSSGIRLRLFHVIETQGWMLVVTMLLLSCIPKILSTVIVTQFYGMSPLDGVALGMLMNTKGILPLIMLNIAWDKQILSMESFSIMMASVFIMTLMVPIVINAMYKPRKLHKQNKLRTIQNLKVEAELRILACVHNPRQASGMTNILEALNANKRSPLRVFALQLIEITGSTTSLLAVHINQPNQQQNGSQALTKSEQDLEDITNIFLECAGGNENTRVETLAAVSSYSTIHEDIYNVAQEKQATLIILPFHKQSSIEGVLEITNSAFKDINQNVMRDAPCSVGIFVDRGLGSLSKVNLRVLMPFIGGPDDREALSVAWRMSKHQGIQLSMVRILLCGGAAEVDTSPQVESKGLLSAVVDYEKQKELDEEYVNAFRLKAVNNEDNITYSEREVHSRDDISEVLYQLDQNGYDLYILGQGSGRNSLVLSDLMKWTDCPELGVIGDMVASNDFGSCSSLLVVQQFGFGGMTFETSTTQHPSEMPENNDGSGPLFVKIE* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03965 825 MobiDBLite consensus disorder prediction 802 825 - -
Rops11g03965 825 Gene3D - 38 444 IPR038770 -
Rops11g03965 825 Gene3D - 483 759 - -
Rops11g03965 825 PANTHER CATION/H + ANTIPORTER 23 791 - -
Rops11g03965 825 Pfam Sodium/hydrogen exchanger family 45 433 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03965 Rops-Chr11 73796116 73799230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03965 14 792 Antiporter Super Family AT2G13620 36.882 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03965 - - gmx:100802381 1146.72