Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03953 ATGGCCTTGAAAGGAGAGGTAGAATCAAAACATGGGTATAGTAGTTTTCAGAGGTTGAACACAGAAACAGAGAACCATGTCTTTACATTTCAATTTCAGTTTCCACAGTCCACAACTACCACCCTGGAAATTTCCACCTCTTCACTCTTCAACCAACACCTTCATTCTCTCTCTCTGGTTTTATCTGACTCTGCCAATGAAGCAGAAAGCACCACAACCCACCACCACCCTTCTCATCAAAATCCATTCTTTTTAATGAAGAAACCACCTTCCTCCTCCGTCACCGTCGCCGTTATATTTATATTCTCTTTGTCGGTACCGTTTTCCCATGCTTTAGGCTCCGGCACCACCCTGGCCGTCACCGACTCTCCAGCAACCGTGTGCGGCATCGTAGCAGGGGAATCAACGCAGCGCATTGAGTGTTACCATCACCGGCAAATCGTTCCCGTCGTCCCCAACGTTTCGTTTTCATCAATTTCCGGTGGGAGAAACTACTTCTGTGGCCTAAGGTCCGGTAACTACAGTTTGCATTTGTGGGACACTACAAACTCTTCATTCCAAAGACAAAGACTTTACCGCAACGATTCTGTTCTATTGGAGAATCTTGCAGTTGGGGATACCCAAGTTTGTGCAACGGTGGTTGGTGTTGGAACGGTGGAGTGTTGGAGAACCAATGACACGTTTCAATGGCGATCTGTTTCTGATCAATTTGCTACTATTTCATCTGGGTATGGATTTTCTTGTGGAATTGTGAGGAATGATTCTCGGGTTAGGTGTTGGGGTGACATGGTTGCTGCTAATCAGATGCAGAATGAGTTTGGAAACATGTCCATGTTAAGTCTTGTAGCCGGTGGTTCACATGTTTGTGGGTTGAATTCAACTGGGTTTTTGGTTTGCAAAGGAAATAACAGTTCTGGACAACTAGATGTTCCTCAAGGTGGGGCTTTTGAATATTCTGGGTTGGCACTTGGAGCTCAGCATGGTTGTGCAATTAGAAGATCAAATGGTTCAGTTGTTTGTTGGGGTGGTACTGGGCAATTTTCGGTGAATGTTACAGAAGGAGTTTTATTTGAGTTGATTGTTTCTGGTTCCAATTTTACTTGTGGATTGACAACAAGCAATTTTTCAGTGGTTTGTTGGGGTCCTGGTTGGTCTAATGGTTCTTCTGATTCTGGCTCAAGGCTTGAACTTCCCTTGCCTCCAATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCCTGATTCTCAATCTCTATGTTCTGGCTCTGGTCACATTTGCAAGCCAAATACTTGTAGGCCTCAAATAACAGCACCGCCACCTCAGCCGCCAGCACCCTCTCCTCCACCGTCATCTCGATCAAAGACCTTGACAAGGGGTTTATTGGCATTTGCCATTGTTGGATCAGTGGGAGCTTTTGCTGGTATATGCACAATAATTTATTGGTTATGGAATGGAGTTTGCTTTGGTAAGAAGAAAGTCCACAATTCAGTGCAACCAACGATCACTAGAGGTAGCAGCAGCTCCAATAATAGCCTATCTTCGATTTCATCTACCATTAGGCGTCAGAGTTCAAGAATCATGAGGCGTCAGAGGAGTGGAACCTCATCAGCAAAGCGTGCAGATAGGGCAGAAGAGTTCACCCTTGCTGAGCTTGTAGCAGCCACCAACAATTTCTCACTAGAGAACAAGATTGGTGCTGGAAGCTTTGGTGTTGTGTATAGAGGCAAACTTGCTGATGGACATGAAGTGGCAATCAAGAGGGGAGAAACCGGTTCAAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCTGAATTGGCCTTCTTGTCCCGTTTACACCATAAACACTTGGTTAGGCTAGTTGGTTTTTGTGTAGAGAAAGATGAAAGGCTCTTGGTGTATGAGCACATGAAGAATAGGGCACTTTATGATCATTTACATGACAAGAACAACGTGGAAAAGAGTAGCAGTGTGTTGAATTCATGGAAAATGAGGATCAAAATTGCTTTGGATGCTTCAAGAGGAATAGAATATCTCCATAGTTATGCTGTTCCATCTATAATTCACAGAGATATCAAGTCTTCAAACATCCTTCTTGATGCTACTTGGACTGCAAGAGTATCTGATTTTGGATTATCATTGATGAGTCCAGAATCTGACCGTGATTACCGACCAATGAAGGCTGCAGGCACAGTTGGTTACATTGATCCTGAGTACTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTCTATGGGCTAGGAGTTGTACTGCTAGAACTTTTAACAGGAAGAAGAGCTATATTCAAGCACGGTGAAGATGGGGGCACCCCAACAAGTGTGGTGGACTTTGCAGTGCCTGCTATTTTGGCTGGAGAGTTGGGGAAAATTTTGGACCATAGGGTTGGACCACCAGAGCCTAATGAAGTAGAGGCAGTGGAGTTAATGGCCTATACTGCTATGCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACGATGGCTGACATTGTAGCCAATTTGGAGAGGGCTTTGATTATTTGTGAGGGTAGCCATGACAGCATTTCCAGCGTTGCAATCTCTATTGTTTCAGATTGA 2622 0.4405 MALKGEVESKHGYSSFQRLNTETENHVFTFQFQFPQSTTTTLEISTSSLFNQHLHSLSLVLSDSANEAESTTTHHHPSHQNPFFLMKKPPSSSVTVAVIFIFSLSVPFSHALGSGTTLAVTDSPATVCGIVAGESTQRIECYHHRQIVPVVPNVSFSSISGGRNYFCGLRSGNYSLHLWDTTNSSFQRQRLYRNDSVLLENLAVGDTQVCATVVGVGTVECWRTNDTFQWRSVSDQFATISSGYGFSCGIVRNDSRVRCWGDMVAANQMQNEFGNMSMLSLVAGGSHVCGLNSTGFLVCKGNNSSGQLDVPQGGAFEYSGLALGAQHGCAIRRSNGSVVCWGGTGQFSVNVTEGVLFELIVSGSNFTCGLTTSNFSVVCWGPGWSNGSSDSGSRLELPLPPILPGPCVQSSCSECGIYPDSQSLCSGSGHICKPNTCRPQITAPPPQPPAPSPPPSSRSKTLTRGLLAFAIVGSVGAFAGICTIIYWLWNGVCFGKKKVHNSVQPTITRGSSSSNNSLSSISSTIRRQSSRIMRRQRSGTSSAKRADRAEEFTLAELVAATNNFSLENKIGAGSFGVVYRGKLADGHEVAIKRGETGSKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCVEKDERLLVYEHMKNRALYDHLHDKNNVEKSSSVLNSWKMRIKIALDASRGIEYLHSYAVPSIIHRDIKSSNILLDATWTARVSDFGLSLMSPESDRDYRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGRRAIFKHGEDGGTPTSVVDFAVPAILAGELGKILDHRVGPPEPNEVEAVELMAYTAMHCVNLEGKDRPTMADIVANLERALIICEGSHDSISSVAISIVSD* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03953 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Rops11g03953 873 MobiDBLite consensus disorder prediction 439 456 - -
Rops11g03953 873 Pfam Protein kinase domain 565 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03953 873 MobiDBLite consensus disorder prediction 505 539 - -
Rops11g03953 873 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 275 859 IPR044815 GO:0004674
Rops11g03953 873 SUPERFAMILY Protein kinase-like (PK-like) 548 850 IPR011009 -
Rops11g03953 873 MobiDBLite consensus disorder prediction 439 459 - -
Rops11g03953 873 Gene3D Transferase(Phosphotransferase) domain 1 645 861 - -
Rops11g03953 873 SUPERFAMILY RCC1/BLIP-II 238 432 IPR009091 -
Rops11g03953 873 ProSitePatterns Protein kinases ATP-binding region signature. 570 592 IPR017441 GO:0005524
Rops11g03953 873 Gene3D Phosphorylase Kinase; domain 1 523 644 - -
Rops11g03953 873 FunFam Putative LRR receptor-like serine/threonine-protein kinase 527 644 - -
Rops11g03953 873 FunFam Serine/threonine-protein kinase-like protein CCR4 645 867 - -
Rops11g03953 873 SMART serkin_6 564 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03953 873 Gene3D - 264 433 IPR009091 -
Rops11g03953 873 MobiDBLite consensus disorder prediction 505 545 - -
Rops11g03953 873 ProSiteProfiles Protein kinase domain profile. 564 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03953 Rops-Chr11 73726649 73729270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03953 91 873 Receptor kinase-like Gene Family AT3G55950 61.548 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Rops11g03953 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03953 - - gmx:100786639 1154.81