Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03939 ATGGGAACTTCAGTGTGTGTGAAAGAAGCTTTGGTAGTGACCCCTTCAGAGCCCACACCCAGTGGGGTGTTGTTACTCTCAGCACTTGACTCCCAACTCTTTCTTCGCTTCACCATAGAGTACCTCCTTGTCTACAGGCCCAGCCCCGGCCTGGACCAGGGTACCACCACGGCTCGCTTCAAAGCTGCATTAGCCAAAGCCTTAGTTCCTTATTACCCATTGGCAGGACGGGTCAGGGCCCGGGCCGATGGCTTGGGCCTTGAAGTATTGTGCCGGGCCCAGGGTGCGGTTTTCGTGGAAGCCTATTCCGACCGTTACACCGCTAACGACTTCGACAGAGCCCCCAAAACGGTTACCCACTGGAGGAAACTCTTGTCGTTTTATGTCTCCGATGTTCTCAGCGGATCTCCGCCGTTAGTTATTCAACTCACTTGGCTAGCCGACGGCGCCGCCGCGGTTGCCGTTGGAATTAACCACTGCATCAGCGACGGCATCGGAAGTGCTGAATTTCTCAATTATGTCGCTGATTTAGCTTCCGGGAAACGCTGTGATCCGAAACCGAGACCCGTTTGGGATCGCCACCTTCTCAACCCACCGCCGGCGAGATTGACTCGGGTTAATTACTCGGCGATTCACCCAGAGTTCAACCGGGTCCCGGATCTATGCGGGTTCATGAACTGGGTCACGAGTGGTCTCAAACCAACATGCATTGTGTTCGATGGGAAACGCCTCAACGAGTTAAAAAGCGTGGCTCGGAGAACGAGTCAACTCGGCGAGTCATCGTTCACGTCGTTCGAGGTGCTGGCGGCGCACGTGTGGAGGAGCTGGGCGAGAGCATTGGGGTTCCCACCGAACCAAACGCTGAAGCTTCTTTTCAGTGTCAACGTGAGGAACCGGGTCAAACCGGGTTTACCCGATGGGTATTACGGGAACGCGTTCGTTTTGGGTTGCGCGCAGAGCAGCGCGAGGGAGCTTGGGGAGAGAGGAATTGGGTTCGGGTCGGGTCTGGTGAAACGGGCGAAGGACAAGGTGGACAGTGAACACGTGAGGAGGGTGGCTGAGTTGGTGTCCGAGTCAAGAGCGAGTCCTGACTCGGTTGGGGTTCTTATATTGTCGCAGTGGTCGAGGTTGGGCCTTGAGAGGGTTGATATTGGAATGGGTAAGCCCATTCATGTTGGGCCCATTTGCTGCGATAGGTACTGTTTGTTCTTGCCGGTGAGGGGTGAAAGGGAGAGTGTTAATGTCACGGTGGCTGTCCCCGCCGCCGCCGTTGACCATTATCACCGTTTCCTCAGGGAATAG 1302 0.5576 MGTSVCVKEALVVTPSEPTPSGVLLLSALDSQLFLRFTIEYLLVYRPSPGLDQGTTTARFKAALAKALVPYYPLAGRVRARADGLGLEVLCRAQGAVFVEAYSDRYTANDFDRAPKTVTHWRKLLSFYVSDVLSGSPPLVIQLTWLADGAAAVAVGINHCISDGIGSAEFLNYVADLASGKRCDPKPRPVWDRHLLNPPPARLTRVNYSAIHPEFNRVPDLCGFMNWVTSGLKPTCIVFDGKRLNELKSVARRTSQLGESSFTSFEVLAAHVWRSWARALGFPPNQTLKLLFSVNVRNRVKPGLPDGYYGNAFVLGCAQSSARELGERGIGFGSGLVKRAKDKVDSEHVRRVAELVSESRASPDSVGVLILSQWSRLGLERVDIGMGKPIHVGPICCDRYCLFLPVRGERESVNVTVAVPAAAVDHYHRFLRE* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03939 433 Gene3D - 229 431 IPR023213 -
Rops11g03939 433 Pfam Transferase family 4 424 - -
Rops11g03939 433 PANTHER ACYL TRANSFERASE 4 4 428 - -
Rops11g03939 433 Gene3D - 2 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03939 Rops-Chr11 73514043 73515344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03939 5 433 Monolignol Biosynthesis Gene Families AT5G48930 27.964 4.17e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03939 - - psat:127083994 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03939 11 73514043 73515344 Rops9g00815 9 12586785 12588092 PCT