Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03931 ATGGATGTTCGAGGAGTTCTGTGCCTTTTAGCGTTGTGTTTGTTGTTTCAGAGCTTTGTTCTGTGCTGTTCTCTGAATGAAGAAGGTAAAGCTCTTTTGAAGTTGAAGCAGGGAATAGTGAGTGACCCTTTTGATTCTTTGTCAAATTGGATTGATGATGAAGTAGCGGTTGACCCGTGTAATTGGTCTGGAATTGAGTGCTTAGATGGAAAAGTGGTGGCCTTGAATTTGAAAGATCTTTGTCTTGGAGGAAATCTAGCACCTGAGCTTGCCAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTCATGGGATCATCCCTAAAGGAATTGTACACTTGAATGAATTGGAGGTTTTGGATTTAGGCTACAACAACTTCAGTGGACCTCTACCTACAGATCTTGGGAGCAATATTTCACTAACAATCCTTTTGCTGGACAACAATGATCTTCTTTGTGGTTTCTCTCCTGAAATCAATGAGTTGAAGATGATTTCTGAATCTCAAGTCGATGAAAACCAGCTAATTAGTGCAGAAAAAATGCCAAGTTGTACAGGAAGATCCATTACAAGGCATGTTGGCCAAAATAGAAAAGGTCTTCGGAGCCTACTGCAAACTCGAATTCATCAAGATCCTCTTAATCGTGTAGCTGATCTTCCTGACAGTCCATCTCCATCTCCATCTCCATCTCCATCTCCTTCTCCTTCTCCTTCTCCTTCTCCATCTCCCTCACCTTCCCCATCTCCCTCAGCAGCTCCACCAACAGTGCTGAAGCCATCTTCCCCTGATTCTTCTTCTCATTCTCCCCTGCCTACACCAGGCTCTGCAACACAATCTAAAAGTTCCTCATCAAAAGTTGCTATTTTGGCTGGAGTTTCAGGTGGTGCTGTATTTCTTTTCATTTCAATGATTGGCATATATCTCTGTAAAACCAACAAGGTATCTACGGTAAAACCATGGGCCACGGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCAAAGCTAAAGAGATCAGAGATTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCACCCAGTGGTACAGTGTACAAAGGGACTTTATCTAATGGTGTTGAAATAGCTGTGGCCTCTGTTACAGTGACATCATCCAAAGATTGGTCAAAGACTTCAGAAGCCCAATTTCGAAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTCATAAATCTTCTTGGATATTGTGAAGAAGAAGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCCCCCAACGGAACACTCTTTGAGCATTTGCACATAAAAGAAGCCGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCCACGGGCATGGCTTACTGCCTGCAACATATGCACCAGTTGGACCCTCCTTTGGCCCATAGCAACCTAAATTCTGCAGCTGTCCAACTCACTGATGATTATGCTGCCAAAATCTCGGATTTGAGTTTCTTGAATGAAATAGCTTCAGCTGAGATAAAAGCTGCTGCTAGAAAACACACTGACATGACATTAGCAAGTGACATTTACAGCTTTGGTGTCGTATTATTTGAAATGGTAACAGGCAGGCTCCCTTATTCAGTGGATGATAATGGCTCACTTGAAGACTGGGCTTCTCACTATTTACAAATGGACCGGCCCCTAAAAGAAATGGTGGATCCAACTCTAGCATCCTTCCAAGAAGAACAGGTGGAAGAAATTGCTGCTTTGATTCAATCTTGTGTCAATCCTGATCAAGAGAAGAGACCAACATTGAAAGAAGTTAGTGTGAGATTAAAAGAGATAACAAAAATAACCCCTGAAATGGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTCTTCTGTAGATGCAAGCTGA 1929 0.4189 MDVRGVLCLLALCLLFQSFVLCCSLNEEGKALLKLKQGIVSDPFDSLSNWIDDEVAVDPCNWSGIECLDGKVVALNLKDLCLGGNLAPELANLVHIKSIILRNNSFHGIIPKGIVHLNELEVLDLGYNNFSGPLPTDLGSNISLTILLLDNNDLLCGFSPEINELKMISESQVDENQLISAEKMPSCTGRSITRHVGQNRKGLRSLLQTRIHQDPLNRVADLPDSPSPSPSPSPSPSPSPSPSPSPSPSPSPSAAPPTVLKPSSPDSSSHSPLPTPGSATQSKSSSSKVAILAGVSGGAVFLFISMIGIYLCKTNKVSTVKPWATGLSGQLQKAFVTGVPKLKRSEIEAACEDFSNVIGTSPSGTVYKGTLSNGVEIAVASVTVTSSKDWSKTSEAQFRKKIDTLSKVNHKNFINLLGYCEEEEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWGTRLRVATGMAYCLQHMHQLDPPLAHSNLNSAAVQLTDDYAAKISDLSFLNEIASAEIKAAARKHTDMTLASDIYSFGVVLFEMVTGRLPYSVDDNGSLEDWASHYLQMDRPLKEMVDPTLASFQEEQVEEIAALIQSCVNPDQEKRPTLKEVSVRLKEITKITPEMAVPKLSPLWWAELEISSVDAS* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03931 642 MobiDBLite consensus disorder prediction 260 285 - -
Rops11g03931 642 Gene3D Transferase(Phosphotransferase) domain 1 435 623 - -
Rops11g03931 642 MobiDBLite consensus disorder prediction 214 285 - -
Rops11g03931 642 Pfam Protein tyrosine and serine/threonine kinase 355 609 IPR001245 GO:0004672|GO:0006468
Rops11g03931 642 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Rops11g03931 642 PANTHER PROTEIN MALE DISCOVERER 2 7 639 - -
Rops11g03931 642 FunFam Inactive receptor-like serine/threonine-protein kinase 326 434 - -
Rops11g03931 642 MobiDBLite consensus disorder prediction 225 259 - -
Rops11g03931 642 Gene3D Phosphorylase Kinase; domain 1 324 434 - -
Rops11g03931 642 FunFam Nuclear pore complex protein NUP107 25 183 - -
Rops11g03931 642 Gene3D Ribonuclease Inhibitor 23 217 IPR032675 -
Rops11g03931 642 ProSiteProfiles Protein kinase domain profile. 352 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03931 642 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Rops11g03931 642 SUPERFAMILY Protein kinase-like (PK-like) 335 611 IPR011009 -
Rops11g03931 642 SUPERFAMILY L domain-like 28 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03931 Rops-Chr11 73453451 73457746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03931 1 613 Receptor kinase-like Gene Family AT5G16000 25.857 7.73e-48 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Rops11g03931 PK_Tyr_Ser-Thr 9.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03931 - - gmx:100784541 945.651