Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03910 ATGAAGCCAGTTTTGGGAGAAGATGAACGTTGGGATGGAGTGGCTGTTACAGAATCAAATTTCTTAGTACTTCAAGCATTCAAACAAGAGTTGGTTGATCCCAAAGGCTTCTTGAGGAGCTGGAATGACAGTGGTTATGGTGCTTGTTCTGGAGGTTGGATTGGTATTAAGTGTGCTAAGGGACAGGTTATTGTAATCCAGCTTCCATGGAAGGGTTTTGGGGGGCATATAACTGAGAGGATTGGACAACTTCAGGGGCTAAGGAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCTTCATTGGGTCTTCTTCCCAACCTCAGAGGGGTTCAGCTATTCAACAATCACCTAACGGGGTCCATCCCTCCTTCATTAGGTTACTGTCCTTTACTTCAATCTCTTGACCTTAGTGATAATTTGCTCACAGGAACAATCCCTGATAGCCTTGCCAATTCCACAAGGCTTTATTGGCTTAACTTGAGTTTTAATTCTTTCTCTGGTTCAATACCAGATAGCCTAACTCACTCAGTTTCTCTCACATTCCTTTCTCTTCAACACAATAATCTCTCTGGCTCCCTTCCTGCTTCTTTTGGCAGATTAAGCCAACTAAGAGAGATTTCCCTTAGTCATAACCAGTTTAGTGGAGTTATACCAAATGCAATAGGAAACCTTTCTAGGCTTAAAAAATTAGATTTTTCTAATAATGCCTTGAAAGGGAGCTTGCCTGTTACCCTCTCCAATTTATCCTCACTTACACTGCTGAATGTAGATAACAACCGCCTTGGCAATCAAATTCCAGAAGCTTTAGGCATATTACATGATCTTTCTGTTCTAATTTTGAGCAGAAACCAATTTAGTGGTCATATTCCTGCAAGTATTGCAAACATCTCCACGCTTACTCAGCTTGACTTATCACTGAATAATCTCAGTGGAGAAATTCCATTCTCCTTTGACACTAAACGTAGTCTTAATCTCTTCAATGTTTCTTACAATAACCTCTCAGGTCCTGTTCCCAATCTACTTGCCAAGAAATTTAACTCAAGCTCTTTTGTGGGAAACGTTCAACTATGTGGGTACAGCCTTTCAACCCCATGTCCTTCTTCCCTAGCTCCATCATCAGGAGTCGTTTCTCCACCTCATGAAGTGTCAACACAACACCATCATAGGAAACTAAGTACCAAAGACATAATTCTCATAGCAGCAGGAGCTCTCCTCATAGTCCTGATAACACTTTGTTGCATCATGCTCTTCTTCCTGATCAGAAAAAGAGCAACATCAAATGCAGAGAATGACAGAGGCACGGGGAGAGCTACAGCTATGAGCAGAGAAAAAGGAGTCCCTCCTGTTGGTGAGGGTGAGGCTGAAGCAGGTGGCGAAGCTGGAGGGAAACTAGTCCATTTTGATGGATCAATGGATTTTACAGCTGATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGCACTTATGGTACTGTGTATAAGGCTACATTGGAGGATGGAAGTCAAGTTGCTGTAAAGAGATTGAGGGAAAAGATCACTAGAAGTCAGAGAGAATTTGAATCAGAAGTTAGTGTTCTTGGGAGAATCCGGCACCCAAATCTTTTGGCTCTAAGGGCCTATTACTTGGGACCCAAAGGGGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTAGCTTCTTTCCTACATGGTCGTGGAAATGAAACAAACATTGATTGGCCAACAAGGATGAAAATAGCACAGGACATAACTCGTGGCTTGTTGTACCTTCATTGTCAGGAGAACATTATACATGGGAACCTTACTTCAAATAATGTCTTGCTTGATGAGAATGCAGATGTTAAAATTGCAGATTTTGGTCTTTCTCGGTTGATGACAACTGATGCTAATTCTAACGCGATAGCTACTGCTGGAGCATTAGGCTACCGAGCACCTGAGCTCTATAAGCTCAAGAAAGTTAACACTAAAACAGATATCTATAGTCTTGGTGTTATCTTGTTAGAACTCCTAACGAGGAAGTCACCTGGGGTGTCTATGAATGGTCTAGATTTACCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACTAATGAGGTTTTTGATGAGGAGTTGATGAGAGATGCATCAACAGTTGGTGATGAGTTGCTAAACACTTTGAAGCTCGCATTGCATTGTGCTGATCCTTCTCCATCAGCACGACCAGAAGTTCAGCAAGTGCTCCAGCAGCTAGAAGAGATTAGACCAGAGAGATCAATCAGTTCTGGGGATGATTTTAACACCATGTAG 2313 0.4207 MKPVLGEDERWDGVAVTESNFLVLQAFKQELVDPKGFLRSWNDSGYGACSGGWIGIKCAKGQVIVIQLPWKGFGGHITERIGQLQGLRKLSLHDNQIGGSIPSSLGLLPNLRGVQLFNNHLTGSIPPSLGYCPLLQSLDLSDNLLTGTIPDSLANSTRLYWLNLSFNSFSGSIPDSLTHSVSLTFLSLQHNNLSGSLPASFGRLSQLREISLSHNQFSGVIPNAIGNLSRLKKLDFSNNALKGSLPVTLSNLSSLTLLNVDNNRLGNQIPEALGILHDLSVLILSRNQFSGHIPASIANISTLTQLDLSLNNLSGEIPFSFDTKRSLNLFNVSYNNLSGPVPNLLAKKFNSSSFVGNVQLCGYSLSTPCPSSLAPSSGVVSPPHEVSTQHHHRKLSTKDIILIAAGALLIVLITLCCIMLFFLIRKRATSNAENDRGTGRATAMSREKGVPPVGEGEAEAGGEAGGKLVHFDGSMDFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITRSQREFESEVSVLGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHGRGNETNIDWPTRMKIAQDITRGLLYLHCQENIIHGNLTSNNVLLDENADVKIADFGLSRLMTTDANSNAIATAGALGYRAPELYKLKKVNTKTDIYSLGVILLELLTRKSPGVSMNGLDLPQWVASIVKEEWTNEVFDEELMRDASTVGDELLNTLKLALHCADPSPSARPEVQQVLQQLEEIRPERSISSGDDFNTM* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03910 770 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 193 755 - -
Rops11g03910 770 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 135 373 - -
Rops11g03910 770 CDD STKc_IRAK 490 755 - -
Rops11g03910 770 Pfam Leucine rich repeat 205 265 IPR001611 GO:0005515
Rops11g03910 770 Pfam Leucine rich repeat 134 193 IPR001611 GO:0005515
Rops11g03910 770 FunFam Leucine-rich repeat receptor-like protein kinase 469 560 - -
Rops11g03910 770 Gene3D Ribonuclease Inhibitor 18 179 IPR032675 -
Rops11g03910 770 Gene3D Phosphorylase Kinase; domain 1 490 561 - -
Rops11g03910 770 Gene3D Ribonuclease Inhibitor 180 250 IPR032675 -
Rops11g03910 770 FunFam Pollen receptor-like kinase 1 561 766 - -
Rops11g03910 770 Pfam Protein tyrosine and serine/threonine kinase 487 752 IPR001245 GO:0004672|GO:0006468
Rops11g03910 770 SUPERFAMILY Protein kinase-like (PK-like) 488 756 IPR011009 -
Rops11g03910 770 SMART LRR_typ_2 252 276 IPR003591 -
Rops11g03910 770 SMART LRR_typ_2 181 203 IPR003591 -
Rops11g03910 770 SMART LRR_typ_2 84 107 IPR003591 -
Rops11g03910 770 SMART LRR_typ_2 204 227 IPR003591 -
Rops11g03910 770 SMART LRR_typ_2 228 251 IPR003591 -
Rops11g03910 770 SMART LRR_typ_2 108 132 IPR003591 -
Rops11g03910 770 SUPERFAMILY L domain-like 57 346 - -
Rops11g03910 770 MobiDBLite consensus disorder prediction 433 462 - -
Rops11g03910 770 ProSiteProfiles Protein kinase domain profile. 484 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03910 770 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Rops11g03910 770 Gene3D Transferase(Phosphotransferase) domain 1 562 767 - -
Rops11g03910 770 FunFam Leucine-rich repeat receptor-like kinase 19 132 - -
Rops11g03910 770 Gene3D Ribonuclease Inhibitor 251 371 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03910 Rops-Chr11 73115515 73117957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03910 11 757 Receptor kinase-like Gene Family AT3G51740 61.104 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops11g03910 PK_Tyr_Ser-Thr 8.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03910 - - aprc:113851294 1196.8