Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03893 ATGTCTCCGATGGCCGGATTTAACGTCCCCCTCGTGCCGGAATCCAAAGCATCGGTGCATCCGCCGGCGTCCGTGTCCGGCGCTGTGTTTAATGTCGCCACCAGCATAGTTGGCGCCGGAATCATGTCAATTCCGGCTCTTTTGAAGGTTATCGGTGTGATTCCGGCGTTTGCCATGATTCTGATCGTGGCGGTGCTGGCAGAAATTTCCGTCGACTTCCTCATGCGGTTTACTCATTCCGGCGAAACGACGACGTATGCCGGTGTCATGAGGGAGGCGTTTGGGTCAGCCGGAGCATTAGCGGCGCAAATTTGTGTCATAGTCACAAACCTTGGGGGTTTAATTCTCTACCTAATTATCATCGGAGATGTGCTTTCTGGAAAGCATAATGGAGATGAAGTGCACTTGGGTATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCCAGGGAAATTGCTCTTCTCTTTACCTTGATCTTTGTTATGCTTCCATTGGTCTTTTACCGACGTGTAGAGTCCTTAAAGTACAGCTCTGCAATATCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGGTTTGCTATTGTTGCTTTGGTGCAAGGAAAAACACATACTCCCAGATTGTTTCCTCAGTTAGAACACCAAACCTCCTTCTTTGATCTGTTTACTGCGGTTCCTGTTGTAGTCACAGCCTTCACATTTCATTTTAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGCCATCTGATATGACCACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTTATCTACTATACAATTGGTCTATTTGGGTACCTGTTATTTGGTGATTCAACACAATCAGACATTCTCATCAATTTTGATCAGAATGCTGATTCTGCGGTTGGTTCAGTGTTCAATAGTTTAATCCGTGTAAGCTATGCACTCCACATCATGCTGGTATTCCCTCTAGTGAACTTCTCTTTGAGAGCCAACATAGATGAAGTTCTCTTCCCCAAGAAACCTCAACTAGCCACAGACAACAAAAGATTTGTGATCCTCTCTCTGGTGCTGCTAGTCTTATCCTACCTTGCTGCTATTGCAATTCCAGATATTTGGTACTTCTTTCAATTTCTGGGATCATCATCTGCAGTGTGCCTTGCCTTCATTTTCCCTGGCAGTATTGTTTTAAGGGATGCTCCTGGTATATCAACAAGAAGGGAAAAAATTATAGCACTGGTTATGATTATACTAGCTGTAGTCACAAGTGTAATTGCCATTTCCACCAACATATACAATTTGTTTAGTAGCAAGTCATGA 1314 0.4406 MSPMAGFNVPLVPESKASVHPPASVSGAVFNVATSIVGAGIMSIPALLKVIGVIPAFAMILIVAVLAEISVDFLMRFTHSGETTTYAGVMREAFGSAGALAAQICVIVTNLGGLILYLIIIGDVLSGKHNGDEVHLGILQQWFGIHWWNSREIALLFTLIFVMLPLVFYRRVESLKYSSAISTLLAVAFVGICCGFAIVALVQGKTHTPRLFPQLEHQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSDMTTAVRLALLLCAVIYYTIGLFGYLLFGDSTQSDILINFDQNADSAVGSVFNSLIRVSYALHIMLVFPLVNFSLRANIDEVLFPKKPQLATDNKRFVILSLVLLVLSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGSIVLRDAPGISTRREKIIALVMIILAVVTSVIAISTNIYNLFSSKS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03893 437 PANTHER AMINO ACID TRANSPORTER 14 420 - -
Rops11g03893 437 Pfam Transmembrane amino acid transporter protein 23 426 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03893 Rops-Chr11 72906641 72908818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03893 1 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.028 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03893 - - gmx:100813056 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03893 11 72906641 72908818 Rops11g03893 11 72906641 72908818 ECH
Rops11g03893 11 72906641 72908818 Rops9g00773 9 12202379 12206913 PCT
Rops9g00772 9 12192917 12195767 Rops11g03893 11 72906641 72908818 PCT