Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03889 ATGAACAATCTCGAAAGTGAGAAGGCAAAAGCAATCACTAGTCCTGACGGTTCTCTAGTTTCAAGACCAAATATTCATGAACTGACTCAAAAAGAGGCCATCAATGAGATTATTTGTCCTCTGCAGACACTTGATGATTGCATAAGATGGTGTTCAGAGGAGAGAGACAGATTTAATCAACAAAAAGAAGATTTAGAATTCCTGAGAGGCTTTGATGCAGCCTTCAAAGCACAGATTCACACTGATATATTGGTCAGTTCAGGCAGCCATGGTCCACCTATACCTGCCCATAAGTCCGTTTTGGCTGTAAGATCAGAAATTTTTAAGAACATGCTAGAGTGTGATGAATGCAAAGCTCCACCCAATAACACCATAACCATACCCGATATGAACCATGAAGAATTAGAGTCTCTGCTGGAGTTTCTCTACAGTGGGACCTTATCTGCGGTAAAATTGGAGAAACATGTCTATGCCTTGTTCCAAGCAGCTGATAAGTATGTTATCCCACACTTGTTGAAACACTGTGAAAAGTACCTGCTCAGTTCACTTAGCACCTCTAATGCCCTTGAGACGCTAGAGATTGCTGACACTTATTCCAAGCAAAACTTGAAGGAAACAACCTTGAATTTCTTAGCTAAAAACATGGAGCAAATGGTGCCATCCTCTAAATTTGAAGCTTTTGTACACAGGAGTCCACATTTAACTGTGCAACTAGTTAAAAGGGCATTCATGAATGGTGCAAAATAA 747 0.4029 MNNLESEKAKAITSPDGSLVSRPNIHELTQKEAINEIICPLQTLDDCIRWCSEERDRFNQQKEDLEFLRGFDAAFKAQIHTDILVSSGSHGPPIPAHKSVLAVRSEIFKNMLECDECKAPPNNTITIPDMNHEELESLLEFLYSGTLSAVKLEKHVYALFQAADKYVIPHLLKHCEKYLLSSLSTSNALETLEIADTYSKQNLKETTLNFLAKNMEQMVPSSKFEAFVHRSPHLTVQLVKRAFMNGAK* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03889 248 Gene3D - 184 247 - -
Rops11g03889 248 SUPERFAMILY POZ domain 66 182 IPR011333 -
Rops11g03889 248 ProSiteProfiles BTB domain profile. 81 151 IPR000210 GO:0005515
Rops11g03889 248 Gene3D Potassium Channel Kv1.1; Chain A 50 183 IPR011333 -
Rops11g03889 248 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 29 245 IPR044784 -
Rops11g03889 248 SMART BTB_4 81 183 IPR000210 GO:0005515
Rops11g03889 248 Pfam BTB/POZ domain 74 182 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03889 Rops-Chr11 72823968 72825040 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops11g03889 BTB 2.9e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03889 K10523 - gmx:100777561 365.925