Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03875 ATGTGTCATGGATTTGTTGTTAGAAAAGATGACGTGATTAGAGATTTGAAGGGAAATGTTGTCATGTGCCAATTAGTATGCAATAGAGCTGGGTTGAGAAATAGAAAACACATTGAGAGGGTTGATAGAATAAGAGATCATAGACCAATCACACGTACTAACTGTGAAGCTAAGTTTATGGTCCATTTTGATTACCGAACATTGAAATGGAGGGTTGCATCGTTTGAGGATACACATAATCATGTGCTTACACCATGTGAACAAGTCCGCCTTCTTCCTGCGTATCGTAGGTTGACTTATGCAGATGAAGCTCAGGTGGATAGCTTGCATCTTTATGGTGTAAGGACATGCCATATAATGGGTTTCATGCTAGCTCAAAAAGGTGGATATACAGACTTAGGATTATGCAAGAAGGATCTATATAATCATCTTGATAAGCAGAGGCATGCCAAAGTAGATGACGGTGATGCATTTGCTGCACTAAGCTACTTGCAAGCAAAGGCAGATAATGATTCGATGCTATTTGCAAAATTTACAACCACCGAAGATGGGAGATTTCAAAATTTGTTTTGGTCAGATGGTTGTAGCAAGAGTGACTTTGAATGCTTTGGTGATGTGCTTGCATTTTATACGACTTATAAGAAGAACAAGTACAACAAGCCATTGGAGCAATGGAGTAAAGGGATTCATGCGAATAACCCCATGGCGTAA 711 0.3938 MCHGFVVRKDDVIRDLKGNVVMCQLVCNRAGLRNRKHIERVDRIRDHRPITRTNCEAKFMVHFDYRTLKWRVASFEDTHNHVLTPCEQVRLLPAYRRLTYADEAQVDSLHLYGVRTCHIMGFMLAQKGGYTDLGLCKKDLYNHLDKQRHAKVDDGDAFAALSYLQAKADNDSMLFAKFTTTEDGRFQNLFWSDGCSKSDFECFGDVLAFYTTYKKNKYNKPLEQWSKGIHANNPMA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03875 236 PANTHER OS01G0519700 PROTEIN 3 211 - -
Rops11g03875 236 Pfam FAR1 DNA-binding domain 3 84 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03875 Rops-Chr11 72705151 72709061 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g03875 FAR1 1.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03875 - - ccaj:109792835 296.204