Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03851 ATGGCAGCAACTATAGATATCTATAATAATAATATTAGCAGCATGACACGACAGGATTTCCTTGACCCATGTAGTGAAGAGCTGATAAAAGCACTTGAGCCTTTTATGAAAAGTGATTCATCTAGCACTTCCTTAACCTCTTTCTCTCTTTCTTCTTCCCCTTCTCCTCCTGCCACCTCTTACCCTTCAGTTTCTTGTTCTTTTCCCAACTTGTACCCAAACTTGTCAAAACCATCCATGCTTTCCCATGAGTTCTCAAGCTACAATCAAAAGGGTCCAAGACAGGTCCAGCTAAACCAACTCACCCCATCTCAAATTCTTCAAATTCAAGCTCAAATTCAGATTCCTCAACAACAGCAACAAAGGCTAACTCAGTTGCAGCACCAAAACCAGCATGCTCTTGGCTTCCTTAGACCAAAACATGTCCCCATGAAGAAACCTACAAAGCTTTACCGTGGAGTGAGACAGAGGCATTGGGGAAAATGGGTTGCTGAGATTAGACTCCCCAAGAATCGTACCCGTCTTTGGCTTGGTACATTTGATACAGGTGAGGAAGCAGCTTTGGCTTATGACAACGCAGCATTTAAACTAAGGGGTGAAAACGCTCGCCTTAATTTTCCTCATCTACGCCACCATGGAGCTCATGTTTATGGTGAGTTTGGAGACTACAAACCTCTCCCTTCCTCTGTCGATGCTAAGCTTCAAGCTATTTGTCAAAGCTTGAAGCATCAGGGGAAAGAAGAAAAGCCCTGTTCTGTTGTTGATACAAAGCCAGTGGTACAGGCAAAACTGGAGTTTCATAAGGCACAATCCAATAATGAATTCGGTTGTCCAGAGTTTGAGGATTATAAGGTGGAGAACCTGACAACCTCTTCATTGTCTGATGAATCATCTGCTGGATCTTCTTCGCCTGAATCTGATATTACTTTCTTGGATTTCTCGGGTTCTAATGAAACGGATAATCTTGGACTGGACTTGGAGAAGTATCCTTCTGTGGAGATTGATTGGGCAGCTATCTGA 1020 0.4304 MAATIDIYNNNISSMTRQDFLDPCSEELIKALEPFMKSDSSSTSLTSFSLSSSPSPPATSYPSVSCSFPNLYPNLSKPSMLSHEFSSYNQKGPRQVQLNQLTPSQILQIQAQIQIPQQQQQRLTQLQHQNQHALGFLRPKHVPMKKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTGEEAALAYDNAAFKLRGENARLNFPHLRHHGAHVYGEFGDYKPLPSSVDAKLQAICQSLKHQGKEEKPCSVVDTKPVVQAKLEFHKAQSNNEFGCPEFEDYKVENLTTSSLSDESSAGSSSPESDITFLDFSGSNETDNLGLDLEKYPSVEIDWAAI* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03851 339 FunFam Ethylene-responsive transcription factor 2 149 208 - -
Rops11g03851 339 MobiDBLite consensus disorder prediction 291 314 - -
Rops11g03851 339 CDD AP2 149 209 IPR001471 GO:0003700|GO:0006355
Rops11g03851 339 ProSiteProfiles AP2/ERF domain profile. 150 207 IPR001471 GO:0003700|GO:0006355
Rops11g03851 339 MobiDBLite consensus disorder prediction 38 59 - -
Rops11g03851 339 Gene3D AP2/ERF domain 150 208 IPR036955 GO:0003700|GO:0006355
Rops11g03851 339 SMART rav1_2 150 213 IPR001471 GO:0003700|GO:0006355
Rops11g03851 339 Pfam AP2 domain 151 200 IPR001471 GO:0003700|GO:0006355
Rops11g03851 339 SUPERFAMILY DNA-binding domain 150 208 IPR016177 GO:0003677
Rops11g03851 339 PRINTS Ethylene responsive element binding protein signature 151 162 IPR001471 GO:0003700|GO:0006355
Rops11g03851 339 PRINTS Ethylene responsive element binding protein signature 173 189 IPR001471 GO:0003700|GO:0006355
Rops11g03851 339 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03851 Rops-Chr11 72370399 72372029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03851 3 339 AP2-EREBP Transcription Factor Family AT4G39780 45.588 3.67e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops11g03851 AP2 2.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03851 K09286 - cave:132166068 343.199