Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03826 ATGTTCAATCGTTATCTTTCGACTGAGATGAAGATTGTTCATATGCTAATTGATTATCATGCTCATTGTCTTGATTTACAAGAAGATGCGCTGTTTGCATTGAAGTCATCATTGAATGCTTCACCCAACCAGCTTACTAACTGGAACAAAAATCAAGTAAACCCTTGTACTTGGTCCAATGTTTACTGTGACCAGAATAGCAATGTTGTTCAAGTTTCACTAGCATTTATGGGATTCACAGGATCCTTGACGCAAAGAATAGGAGCTCTAAAAAGTCTTACAACTCTTTCTTTACAAGGGAATAGCATCACTGGTGACATACCAAAAGAATTTGGAAACCTTACAAACTTGGTTAGATTGGACTTGGAAAATAACAGATTAACTGGTGAAATACCATCTTCTCTTGGTAATCTTAAAAAGCTTCAATTCTTGACATTGAGTCAAAACAATTTCAATGGGACTATTCCAGAATCACTTGGTAGTCTCCCGAGCTTGATCAATGTTCTGCTCGATTCAAATGATCTCAGTGGACAGATTCCTGAGCAGTTATTCAACGTTTCTAAGTACAATTTCACTGGAAATAAGTTGAATTGTGGCGTGAGTTATCATCATCTTTGCACATCCGATAATGCAGATCAAGGTTCTTCACACAAACCAAAAATAGGCCTCATAGTTGGAATTGTTATAGGTTTAGTTGTTATTCTTTTGCTTGGTGGCCTGCTGTTTTTCTGGTGCAAGGGGTACAAGCGTGAAGATTTTGTAGATGTTGCAGGTGAAGTTGATAGGCGAATTACATTTGGTCAAATAAAAAGATTTTCCTGGAGAGAGCTACAGATAGCTACAGACAATTTCAGCGAGAAAAATGTTCTAGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGTGTTCTAGCTGATGGCACAAAAATTGCTGTCAAAAGGTTAACTGATTATGAAAGTCCTGGGGGAGATGCAGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTCCATAGGAATCTGTTACGGCTCATTGGCTTTTGTACTACTCCAACTGAACGCCTCTTAGTTTATCCCTTCATGCAGAACTTAAGTGTTGCCTATCGTATACGAGAACTCAAACCTGGGGAACCTGTTTTGGATTGGGCTACAAGAAAACGAGTGGCTTTGGGAACAGCCCGTGGCCTAGAATATCTTCACGAGCAATGTGATCCTAAGATTATTCATAGGGATGTGAAGGCAGCTAATATATTACTAGATGGAGATTTTGAAGCAGTTGTAGGTGACTTTGGTTTAGCTAAATTAGTCGATGTTCAAAAGACTAATGTGACAACTCAAGTTCGCGGGACAATGGGCCATATAGCTCCTGAATACTTGTCCACTGGAAAATCTTCAGAAAGGACGGATGTTTTTGGTTATGGGATTATGCTTTTGGAGCTTGTTACAGGTCAACGTGCCATTGACTTTTCACGTTTGGAAGAGGAAGATGATGTGTTATTGCTTGACCATGTTAAGAAACTACAACGGGAGAAAAAACTGGATGATATTGTTGACTGCAACCTTAATAAAAATTACAACATAGAAGAGGTTGAAATGATTGTACAAGTTGCATTACTTTGCACGCAAGCATCGCCAGAGGATCGTCCTGCAATGTCAGAGGTTGTAAGAATGTTAGAGGGAGAAGGGCTGGCTGAAAGGTGGGAGGAATGGCAACATGTGGAGGTCACTAGGAGGCAAGACTATGAGAGACTACAAAGAAGATTGGAGTGGGGAGAAGATTCGGTTCATAACCAAGAAGCCATTGAGTTGTCTGGTGGAAGATGA 1824 0.4008 MFNRYLSTEMKIVHMLIDYHAHCLDLQEDALFALKSSLNASPNQLTNWNKNQVNPCTWSNVYCDQNSNVVQVSLAFMGFTGSLTQRIGALKSLTTLSLQGNSITGDIPKEFGNLTNLVRLDLENNRLTGEIPSSLGNLKKLQFLTLSQNNFNGTIPESLGSLPSLINVLLDSNDLSGQIPEQLFNVSKYNFTGNKLNCGVSYHHLCTSDNADQGSSHKPKIGLIVGIVIGLVVILLLGGLLFFWCKGYKREDFVDVAGEVDRRITFGQIKRFSWRELQIATDNFSEKNVLGQGGFGKVYKGVLADGTKIAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRIRELKPGEPVLDWATRKRVALGTARGLEYLHEQCDPKIIHRDVKAANILLDGDFEAVVGDFGLAKLVDVQKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREKKLDDIVDCNLNKNYNIEEVEMIVQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVEVTRRQDYERLQRRLEWGEDSVHNQEAIELSGGR* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03826 607 Gene3D Ribonuclease Inhibitor 25 207 IPR032675 -
Rops11g03826 607 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Rops11g03826 607 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Rops11g03826 607 SMART serkin_6 284 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03826 607 FunFam Somatic embryogenesis receptor kinase 1 253 360 - -
Rops11g03826 607 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 21 569 - -
Rops11g03826 607 FunFam Somatic embryogenesis receptor-like kinase 1 361 578 - -
Rops11g03826 607 ProSiteProfiles Protein kinase domain profile. 284 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03826 607 Pfam Protein kinase domain 285 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03826 607 SUPERFAMILY L domain-like 22 197 - -
Rops11g03826 607 Gene3D Transferase(Phosphotransferase) domain 1 361 578 - -
Rops11g03826 607 SUPERFAMILY Protein kinase-like (PK-like) 263 559 IPR011009 -
Rops11g03826 607 FunFam Putative LRR receptor-like serine/threonine-protein kinase 24 208 - -
Rops11g03826 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Rops11g03826 607 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 452 563 - -
Rops11g03826 607 Pfam Leucine Rich repeats (2 copies) 91 130 IPR025875 -
Rops11g03826 607 Gene3D Phosphorylase Kinase; domain 1 253 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03826 Rops-Chr11 72019637 72028410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03826 9 607 Receptor kinase-like Gene Family AT5G10290 73.806 0.0 888
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Rops11g03826 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03826 - - gmx:100786654 1006.9