Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03815 ATGGAGAAAAGAAGTGGTGAACTATACGCTGTCAAGGTCATTGAGAGAGGCCTAAAGATTGATGAGCATGTGCAAAGGGAGATAATAAATCACAGGTCCTTGAAACATCCCAATATCATTAGATTTAAGGAGGTTCTGTGTACTCCAACTCATCTAGCCATAGTCATGGAATATGCTGCAGGGGGAGAACTATTTGAAAGAATATGCAATGCTGGTAGATTTTGTGAAGACGAGGCAAGATATTTCTTCCGGCAATTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAGTTTGCCATAGAGATCTTAAGTTGGAAAATACACTTTTAGATGGAAGCACAGCACCACAACTTAAAATATGTGACTTTGGTTACTCCAAGTCATCTGTTCTGCACTCTCAGCCTAAATCTACCGTGGGAACCCCGGCATATATAGCACCAGAGGTCTTGTCAAGAAGAGAATATGATGGGAAGGTTGCTGATGTTTGGTCTTGTGGGGTGACCTTATATGTGATGCTAGTTGGTAGTTACCCTTTTGAAGATCCAGATGATCCACGAAACTTCAGAAAGACACTTCAGCGAATTATTGGGGTCCACTATTCTATCCCAGACTATGTTCGTATCTCTAAAGATTGTAAACACCTTCTATCACGAATATTTGTGGACAACCCGGAGAAGAGAATCACAATCCCAGAAATTAAAATGCACCCGTGGTTCCTCAAAAAGTTGCCAAGGGAATTTATGGACGAAAGGGAAGATGAGTTGCAAAACGATGTGAATGGTTTGGATGATTCATCTCAGAGCATTGACGAAATACTGTCCATAATTAAAGAGGCAAGAAAGCAAGGTGAGGGCCCAAAATTTGATGGACAATTTGTCGGAGGTGACATGGATCCTGATGAGATGGATGAAGATACTGATATTGATGATATAGAAACAAGTGGCGATTTTGATTTTGTATAG 963 0.4071 MEKRSGELYAVKVIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLCTPTHLAIVMEYAAGGELFERICNAGRFCEDEARYFFRQLISGVSYCHSMEVCHRDLKLENTLLDGSTAPQLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGSYPFEDPDDPRNFRKTLQRIIGVHYSIPDYVRISKDCKHLLSRIFVDNPEKRITIPEIKMHPWFLKKLPREFMDEREDELQNDVNGLDDSSQSIDEILSIIKEARKQGEGPKFDGQFVGGDMDPDEMDEDTDIDDIETSGDFDFV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03815 320 SMART serkin_6 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03815 320 MobiDBLite consensus disorder prediction 296 320 - -
Rops11g03815 320 SUPERFAMILY Protein kinase-like (PK-like) 3 246 IPR011009 -
Rops11g03815 320 MobiDBLite consensus disorder prediction 280 320 - -
Rops11g03815 320 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Rops11g03815 320 Gene3D Transferase(Phosphotransferase) domain 1 59 247 - -
Rops11g03815 320 Pfam Protein kinase domain 2 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03815 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 98 110 IPR008271 GO:0004672|GO:0006468
Rops11g03815 320 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03815 320 FunFam Serine/threonine-protein kinase SRK2E 59 247 - -
Rops11g03815 320 PANTHER SERINE/THREONINE KINASE 9 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03815 Rops-Chr11 71904811 71909326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03815 5 264 CBL-interacting serine-threonine protein kinases AT4G24400 43.866 4.38e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Rops11g03815 Pkinase 1.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03815 K14498 - gmx:100807981 535.413